Gene : Cagra.13025s0009 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  9
Name:  ? Cagra.13025s0009 Secondary Identifier:  ? PAC:28902504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13025s0009 0.5kb upstream 0.5kb upstream 4387 true Scaffold13025: 36890-41276 Capsella grandiflora
Cagra.13025s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold13025: 40777-41276 Capsella grandiflora
Cagra.13025s0009 0.5kb downstream 0.5kb downstream 4387 true Scaffold13025: 36390-40776 Capsella grandiflora
Cagra.13025s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold13025: 36390-36889 Capsella grandiflora
Cagra.13025s0009 1.0kb upstream 1.0kb upstream 4887 true Scaffold13025: 36890-41776 Capsella grandiflora
Cagra.13025s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold13025: 40777-41776 Capsella grandiflora
Cagra.13025s0009 1.0kb downstream 1.0kb downstream 4887 true Scaffold13025: 35890-40776 Capsella grandiflora
Cagra.13025s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold13025: 35890-36889 Capsella grandiflora
Cagra.13025s0009 2.0kb upstream 2.0kb upstream 5887 true Scaffold13025: 36890-42776 Capsella grandiflora
Cagra.13025s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold13025: 40777-42776 Capsella grandiflora
Cagra.13025s0009 2.0kb downstream 2.0kb downstream 5887 true Scaffold13025: 34890-40776 Capsella grandiflora
Cagra.13025s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold13025: 34890-36889 Capsella grandiflora
Cagra.13025s0009 5.0kb upstream 5.0kb upstream 8887 true Scaffold13025: 36890-45776 Capsella grandiflora
Cagra.13025s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold13025: 40777-45776 Capsella grandiflora
Cagra.13025s0009 5.0kb downstream 5.0kb downstream 8887 true Scaffold13025: 31890-40776 Capsella grandiflora
Cagra.13025s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold13025: 31890-36889 Capsella grandiflora
Cagra.13025s0009 10.0kb upstream 10.0kb upstream 13887 true Scaffold13025: 36890-50776 Capsella grandiflora
Cagra.13025s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold13025: 40777-50776 Capsella grandiflora
Cagra.13025s0009 10.0kb downstream 10.0kb downstream 13887 true Scaffold13025: 26890-40776 Capsella grandiflora
Cagra.13025s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold13025: 26890-36889 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377715 5261 Brassicaceae View MSA
123834353 5264 Brassicales-Malvales View MSA
124339820 5266 SBM View MSA
124251579 5268 Malvidae View MSA
124072588 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain