Gene : Cagra.13056s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24326:SF176 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13-RELATED Genomic Order:  1
Name:  ? Cagra.13056s0001 Secondary Identifier:  ? PAC:28894881
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13056s0001 0.5kb upstream 0.5kb upstream 2213 true Scaffold13056: 36-2248 Capsella grandiflora
Cagra.13056s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold13056: 1749-2248 Capsella grandiflora
Cagra.13056s0001 0.5kb downstream 0.5kb downstream 1748 true Scaffold13056: 1-1748 Capsella grandiflora
Cagra.13056s0001 0.5kb downstream 0.5kb downstream 35 false Scaffold13056: 1-35 Capsella grandiflora
Cagra.13056s0001 1.0kb upstream 1.0kb upstream 2713 true Scaffold13056: 36-2748 Capsella grandiflora
Cagra.13056s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold13056: 1749-2748 Capsella grandiflora
Cagra.13056s0001 1.0kb downstream 1.0kb downstream 1748 true Scaffold13056: 1-1748 Capsella grandiflora
Cagra.13056s0001 1.0kb downstream 1.0kb downstream 35 false Scaffold13056: 1-35 Capsella grandiflora
Cagra.13056s0001 2.0kb upstream 2.0kb upstream 3713 true Scaffold13056: 36-3748 Capsella grandiflora
Cagra.13056s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold13056: 1749-3748 Capsella grandiflora
Cagra.13056s0001 2.0kb downstream 2.0kb downstream 1748 true Scaffold13056: 1-1748 Capsella grandiflora
Cagra.13056s0001 2.0kb downstream 2.0kb downstream 35 false Scaffold13056: 1-35 Capsella grandiflora
Cagra.13056s0001 5.0kb upstream 5.0kb upstream 6713 true Scaffold13056: 36-6748 Capsella grandiflora
Cagra.13056s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold13056: 1749-6748 Capsella grandiflora
Cagra.13056s0001 5.0kb downstream 5.0kb downstream 1748 true Scaffold13056: 1-1748 Capsella grandiflora
Cagra.13056s0001 5.0kb downstream 5.0kb downstream 35 false Scaffold13056: 1-35 Capsella grandiflora
Cagra.13056s0001 10.0kb upstream 10.0kb upstream 11713 true Scaffold13056: 36-11748 Capsella grandiflora
Cagra.13056s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold13056: 1749-11748 Capsella grandiflora
Cagra.13056s0001 10.0kb downstream 10.0kb downstream 1748 true Scaffold13056: 1-1748 Capsella grandiflora
Cagra.13056s0001 10.0kb downstream 10.0kb downstream 35 false Scaffold13056: 1-35 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367597 5261 Brassicaceae View MSA
123840081 5264 Brassicales-Malvales View MSA
124345993 5266 SBM View MSA
124238440 5268 Malvidae View MSA
124061790 5270 Rosid View MSA
123747120 5271 Pentapetalae View MSA
122786437 5272 Eudicot View MSA
122042617 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain