Gene : Cagra.13142s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23111//PTHR23111:SF29 - ZINC FINGER PROTEIN Genomic Order:  2
Name:  ? Cagra.13142s0002 Secondary Identifier:  ? PAC:28902522
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13142s0002 0.5kb upstream 0.5kb upstream 2961 true Scaffold13142: 10749-13709 Capsella grandiflora
Cagra.13142s0002 0.5kb upstream 0.5kb upstream 296 false Scaffold13142: 13414-13709 Capsella grandiflora
Cagra.13142s0002 0.5kb downstream 0.5kb downstream 3165 true Scaffold13142: 10249-13413 Capsella grandiflora
Cagra.13142s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold13142: 10249-10748 Capsella grandiflora
Cagra.13142s0002 1.0kb upstream 1.0kb upstream 2961 true Scaffold13142: 10749-13709 Capsella grandiflora
Cagra.13142s0002 1.0kb upstream 1.0kb upstream 296 false Scaffold13142: 13414-13709 Capsella grandiflora
Cagra.13142s0002 1.0kb downstream 1.0kb downstream 3665 true Scaffold13142: 9749-13413 Capsella grandiflora
Cagra.13142s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold13142: 9749-10748 Capsella grandiflora
Cagra.13142s0002 2.0kb upstream 2.0kb upstream 2961 true Scaffold13142: 10749-13709 Capsella grandiflora
Cagra.13142s0002 2.0kb upstream 2.0kb upstream 296 false Scaffold13142: 13414-13709 Capsella grandiflora
Cagra.13142s0002 2.0kb downstream 2.0kb downstream 4665 true Scaffold13142: 8749-13413 Capsella grandiflora
Cagra.13142s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold13142: 8749-10748 Capsella grandiflora
Cagra.13142s0002 5.0kb upstream 5.0kb upstream 2961 true Scaffold13142: 10749-13709 Capsella grandiflora
Cagra.13142s0002 5.0kb upstream 5.0kb upstream 296 false Scaffold13142: 13414-13709 Capsella grandiflora
Cagra.13142s0002 5.0kb downstream 5.0kb downstream 7665 true Scaffold13142: 5749-13413 Capsella grandiflora
Cagra.13142s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold13142: 5749-10748 Capsella grandiflora
Cagra.13142s0002 10.0kb upstream 10.0kb upstream 2961 true Scaffold13142: 10749-13709 Capsella grandiflora
Cagra.13142s0002 10.0kb upstream 10.0kb upstream 296 false Scaffold13142: 13414-13709 Capsella grandiflora
Cagra.13142s0002 10.0kb downstream 10.0kb downstream 12665 true Scaffold13142: 749-13413 Capsella grandiflora
Cagra.13142s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold13142: 749-10748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332486 5261 Brassicaceae Singleton cluster - no MSA
123773551 5264 Brassicales-Malvales Singleton cluster - no MSA
124272029 5266 SBM Singleton cluster - no MSA
124250004 5268 Malvidae View MSA
124064644 5270 Rosid View MSA
123741266 5271 Pentapetalae View MSA
122789459 5272 Eudicot View MSA
122043265 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain