Gene : Cagra.13170s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31964:SF52 - DROUGHT RESPONSIVE ATP-BINDING MOTIF CONTAINING PROTEIN Genomic Order:  1
Name:  ? Cagra.13170s0001 Secondary Identifier:  ? PAC:28906136
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13170s0001 0.5kb upstream 0.5kb upstream 1246 true Scaffold13170: 1-1246 Capsella grandiflora
Cagra.13170s0001 0.5kb upstream 0.5kb upstream 74 false Scaffold13170: 1-74 Capsella grandiflora
Cagra.13170s0001 0.5kb downstream 0.5kb downstream 1672 true Scaffold13170: 75-1746 Capsella grandiflora
Cagra.13170s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13170: 1247-1746 Capsella grandiflora
Cagra.13170s0001 1.0kb upstream 1.0kb upstream 1246 true Scaffold13170: 1-1246 Capsella grandiflora
Cagra.13170s0001 1.0kb upstream 1.0kb upstream 74 false Scaffold13170: 1-74 Capsella grandiflora
Cagra.13170s0001 1.0kb downstream 1.0kb downstream 2172 true Scaffold13170: 75-2246 Capsella grandiflora
Cagra.13170s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13170: 1247-2246 Capsella grandiflora
Cagra.13170s0001 2.0kb upstream 2.0kb upstream 1246 true Scaffold13170: 1-1246 Capsella grandiflora
Cagra.13170s0001 2.0kb upstream 2.0kb upstream 74 false Scaffold13170: 1-74 Capsella grandiflora
Cagra.13170s0001 2.0kb downstream 2.0kb downstream 3172 true Scaffold13170: 75-3246 Capsella grandiflora
Cagra.13170s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold13170: 1247-3246 Capsella grandiflora
Cagra.13170s0001 5.0kb upstream 5.0kb upstream 1246 true Scaffold13170: 1-1246 Capsella grandiflora
Cagra.13170s0001 5.0kb upstream 5.0kb upstream 74 false Scaffold13170: 1-74 Capsella grandiflora
Cagra.13170s0001 5.0kb downstream 5.0kb downstream 6172 true Scaffold13170: 75-6246 Capsella grandiflora
Cagra.13170s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold13170: 1247-6246 Capsella grandiflora
Cagra.13170s0001 10.0kb upstream 10.0kb upstream 1246 true Scaffold13170: 1-1246 Capsella grandiflora
Cagra.13170s0001 10.0kb upstream 10.0kb upstream 74 false Scaffold13170: 1-74 Capsella grandiflora
Cagra.13170s0001 10.0kb downstream 10.0kb downstream 11172 true Scaffold13170: 75-11246 Capsella grandiflora
Cagra.13170s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold13170: 1247-11246 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369945 5261 Brassicaceae View MSA
123831219 5264 Brassicales-Malvales View MSA
124339223 5266 SBM View MSA
124253306 5268 Malvidae View MSA
124067301 5270 Rosid View MSA
123752921 5271 Pentapetalae View MSA
122791462 5272 Eudicot View MSA
122050210 5273 Angiosperm View MSA
121350546 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain