Gene : Cagra.13273s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10457//PTHR10457:SF12 - MEVALONATE KINASE/GALACTOKINASE Genomic Order:  3
Name:  ? Cagra.13273s0003 Secondary Identifier:  ? PAC:28893569
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-82 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13273s0003 0.5kb upstream 0.5kb upstream 7049 true Scaffold13273: 11366-18414 Capsella grandiflora
Cagra.13273s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13273: 17915-18414 Capsella grandiflora
Cagra.13273s0003 0.5kb downstream 0.5kb downstream 7049 true Scaffold13273: 10866-17914 Capsella grandiflora
Cagra.13273s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13273: 10866-11365 Capsella grandiflora
Cagra.13273s0003 1.0kb upstream 1.0kb upstream 7549 true Scaffold13273: 11366-18914 Capsella grandiflora
Cagra.13273s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13273: 17915-18914 Capsella grandiflora
Cagra.13273s0003 1.0kb downstream 1.0kb downstream 7549 true Scaffold13273: 10366-17914 Capsella grandiflora
Cagra.13273s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13273: 10366-11365 Capsella grandiflora
Cagra.13273s0003 2.0kb upstream 2.0kb upstream 8287 true Scaffold13273: 11366-19652 Capsella grandiflora
Cagra.13273s0003 2.0kb upstream 2.0kb upstream 1738 false Scaffold13273: 17915-19652 Capsella grandiflora
Cagra.13273s0003 2.0kb downstream 2.0kb downstream 8549 true Scaffold13273: 9366-17914 Capsella grandiflora
Cagra.13273s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13273: 9366-11365 Capsella grandiflora
Cagra.13273s0003 5.0kb upstream 5.0kb upstream 8287 true Scaffold13273: 11366-19652 Capsella grandiflora
Cagra.13273s0003 5.0kb upstream 5.0kb upstream 1738 false Scaffold13273: 17915-19652 Capsella grandiflora
Cagra.13273s0003 5.0kb downstream 5.0kb downstream 11549 true Scaffold13273: 6366-17914 Capsella grandiflora
Cagra.13273s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold13273: 6366-11365 Capsella grandiflora
Cagra.13273s0003 10.0kb upstream 10.0kb upstream 8287 true Scaffold13273: 11366-19652 Capsella grandiflora
Cagra.13273s0003 10.0kb upstream 10.0kb upstream 1738 false Scaffold13273: 17915-19652 Capsella grandiflora
Cagra.13273s0003 10.0kb downstream 10.0kb downstream 16549 true Scaffold13273: 1366-17914 Capsella grandiflora
Cagra.13273s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold13273: 1366-11365 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511597 5273 Angiosperm View MSA
122377641 5261 Brassicaceae View MSA
123801591 5264 Brassicales-Malvales View MSA
124298874 5266 SBM View MSA
124150418 5268 Malvidae View MSA
123876033 5270 Rosid View MSA
123459764 5271 Pentapetalae View MSA
122495150 5272 Eudicot View MSA
120784638 5274 Embryophyte View MSA
122826537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain