Gene : Cagra.13389s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR27002:SF42 - G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 Genomic Order:  3
Name:  ? Cagra.13389s0003 Secondary Identifier:  ? PAC:28907488
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13389s0003 0.5kb upstream 0.5kb upstream 3794 true Scaffold13389: 8664-12457 Capsella grandiflora
Cagra.13389s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13389: 11958-12457 Capsella grandiflora
Cagra.13389s0003 0.5kb downstream 0.5kb downstream 3794 true Scaffold13389: 8164-11957 Capsella grandiflora
Cagra.13389s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13389: 8164-8663 Capsella grandiflora
Cagra.13389s0003 1.0kb upstream 1.0kb upstream 4294 true Scaffold13389: 8664-12957 Capsella grandiflora
Cagra.13389s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13389: 11958-12957 Capsella grandiflora
Cagra.13389s0003 1.0kb downstream 1.0kb downstream 4294 true Scaffold13389: 7664-11957 Capsella grandiflora
Cagra.13389s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13389: 7664-8663 Capsella grandiflora
Cagra.13389s0003 2.0kb upstream 2.0kb upstream 5294 true Scaffold13389: 8664-13957 Capsella grandiflora
Cagra.13389s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13389: 11958-13957 Capsella grandiflora
Cagra.13389s0003 2.0kb downstream 2.0kb downstream 5294 true Scaffold13389: 6664-11957 Capsella grandiflora
Cagra.13389s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13389: 6664-8663 Capsella grandiflora
Cagra.13389s0003 5.0kb upstream 5.0kb upstream 8294 true Scaffold13389: 8664-16957 Capsella grandiflora
Cagra.13389s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold13389: 11958-16957 Capsella grandiflora
Cagra.13389s0003 5.0kb downstream 5.0kb downstream 8294 true Scaffold13389: 3664-11957 Capsella grandiflora
Cagra.13389s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold13389: 3664-8663 Capsella grandiflora
Cagra.13389s0003 10.0kb upstream 10.0kb upstream 13294 true Scaffold13389: 8664-21957 Capsella grandiflora
Cagra.13389s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold13389: 11958-21957 Capsella grandiflora
Cagra.13389s0003 10.0kb downstream 10.0kb downstream 11957 true Scaffold13389: 1-11957 Capsella grandiflora
Cagra.13389s0003 10.0kb downstream 10.0kb downstream 8663 false Scaffold13389: 1-8663 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360351 5261 Brassicaceae View MSA
123831470 5264 Brassicales-Malvales View MSA
124342595 5266 SBM View MSA
124244707 5268 Malvidae View MSA
124064956 5270 Rosid View MSA
123738478 5271 Pentapetalae View MSA
122790602 5272 Eudicot View MSA
122050029 5273 Angiosperm View MSA
121311695 5274 Embryophyte View MSA
123348958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain