Gene : Cagra.1062s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  1
Name:  ? Cagra.1062s0001 Secondary Identifier:  ? PAC:28908857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1062s0001 0.5kb upstream 0.5kb upstream 1801 true Scaffold1062: 1-1801 Capsella grandiflora
Cagra.1062s0001 0.5kb upstream 0.5kb upstream 159 false Scaffold1062: 1-159 Capsella grandiflora
Cagra.1062s0001 0.5kb downstream 0.5kb downstream 2142 true Scaffold1062: 160-2301 Capsella grandiflora
Cagra.1062s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1062: 1802-2301 Capsella grandiflora
Cagra.1062s0001 1.0kb upstream 1.0kb upstream 1801 true Scaffold1062: 1-1801 Capsella grandiflora
Cagra.1062s0001 1.0kb upstream 1.0kb upstream 159 false Scaffold1062: 1-159 Capsella grandiflora
Cagra.1062s0001 1.0kb downstream 1.0kb downstream 2642 true Scaffold1062: 160-2801 Capsella grandiflora
Cagra.1062s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1062: 1802-2801 Capsella grandiflora
Cagra.1062s0001 2.0kb upstream 2.0kb upstream 1801 true Scaffold1062: 1-1801 Capsella grandiflora
Cagra.1062s0001 2.0kb upstream 2.0kb upstream 159 false Scaffold1062: 1-159 Capsella grandiflora
Cagra.1062s0001 2.0kb downstream 2.0kb downstream 3642 true Scaffold1062: 160-3801 Capsella grandiflora
Cagra.1062s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1062: 1802-3801 Capsella grandiflora
Cagra.1062s0001 5.0kb upstream 5.0kb upstream 1801 true Scaffold1062: 1-1801 Capsella grandiflora
Cagra.1062s0001 5.0kb upstream 5.0kb upstream 159 false Scaffold1062: 1-159 Capsella grandiflora
Cagra.1062s0001 5.0kb downstream 5.0kb downstream 6642 true Scaffold1062: 160-6801 Capsella grandiflora
Cagra.1062s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1062: 1802-6801 Capsella grandiflora
Cagra.1062s0001 10.0kb upstream 10.0kb upstream 1801 true Scaffold1062: 1-1801 Capsella grandiflora
Cagra.1062s0001 10.0kb upstream 10.0kb upstream 159 false Scaffold1062: 1-159 Capsella grandiflora
Cagra.1062s0001 10.0kb downstream 10.0kb downstream 11642 true Scaffold1062: 160-11801 Capsella grandiflora
Cagra.1062s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1062: 1802-11801 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367766 5261 Brassicaceae View MSA
123830469 5264 Brassicales-Malvales View MSA
124339779 5266 SBM View MSA
124237455 5268 Malvidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain