Gene : Cagra.28035s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR22835:SF174 - GDSL ESTERASE/LIPASE 1-RELATED Genomic Order:  1
Name:  ? Cagra.28035s0001 Secondary Identifier:  ? PAC:28914767
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6303 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.28035s0001 0.5kb upstream 0.5kb upstream 1971 true Scaffold28035: 106-2076 Capsella grandiflora
Cagra.28035s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold28035: 106-605 Capsella grandiflora
Cagra.28035s0001 0.5kb downstream 0.5kb downstream 1516 true Scaffold28035: 606-2121 Capsella grandiflora
Cagra.28035s0001 0.5kb downstream 0.5kb downstream 45 false Scaffold28035: 2077-2121 Capsella grandiflora
Cagra.28035s0001 1.0kb upstream 1.0kb upstream 2076 true Scaffold28035: 1-2076 Capsella grandiflora
Cagra.28035s0001 1.0kb upstream 1.0kb upstream 605 false Scaffold28035: 1-605 Capsella grandiflora
Cagra.28035s0001 1.0kb downstream 1.0kb downstream 1516 true Scaffold28035: 606-2121 Capsella grandiflora
Cagra.28035s0001 1.0kb downstream 1.0kb downstream 45 false Scaffold28035: 2077-2121 Capsella grandiflora
Cagra.28035s0001 2.0kb upstream 2.0kb upstream 2076 true Scaffold28035: 1-2076 Capsella grandiflora
Cagra.28035s0001 2.0kb upstream 2.0kb upstream 605 false Scaffold28035: 1-605 Capsella grandiflora
Cagra.28035s0001 2.0kb downstream 2.0kb downstream 1516 true Scaffold28035: 606-2121 Capsella grandiflora
Cagra.28035s0001 2.0kb downstream 2.0kb downstream 45 false Scaffold28035: 2077-2121 Capsella grandiflora
Cagra.28035s0001 5.0kb upstream 5.0kb upstream 2076 true Scaffold28035: 1-2076 Capsella grandiflora
Cagra.28035s0001 5.0kb upstream 5.0kb upstream 605 false Scaffold28035: 1-605 Capsella grandiflora
Cagra.28035s0001 5.0kb downstream 5.0kb downstream 1516 true Scaffold28035: 606-2121 Capsella grandiflora
Cagra.28035s0001 5.0kb downstream 5.0kb downstream 45 false Scaffold28035: 2077-2121 Capsella grandiflora
Cagra.28035s0001 10.0kb upstream 10.0kb upstream 2076 true Scaffold28035: 1-2076 Capsella grandiflora
Cagra.28035s0001 10.0kb upstream 10.0kb upstream 605 false Scaffold28035: 1-605 Capsella grandiflora
Cagra.28035s0001 10.0kb downstream 10.0kb downstream 1516 true Scaffold28035: 606-2121 Capsella grandiflora
Cagra.28035s0001 10.0kb downstream 10.0kb downstream 45 false Scaffold28035: 2077-2121 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343447 5261 Brassicaceae View MSA
123841664 5264 Brassicales-Malvales View MSA
124349446 5266 SBM View MSA
124250380 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain