Gene : Cagra.28200s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR19957:SF129 - SYNTAXIN-71-RELATED Genomic Order:  1
Name:  ? Cagra.28200s0001 Secondary Identifier:  ? PAC:28919870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.28200s0001 0.5kb upstream 0.5kb upstream 2338 true Scaffold28200: 81-2418 Capsella grandiflora
Cagra.28200s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold28200: 81-580 Capsella grandiflora
Cagra.28200s0001 0.5kb downstream 0.5kb downstream 2338 true Scaffold28200: 581-2918 Capsella grandiflora
Cagra.28200s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold28200: 2419-2918 Capsella grandiflora
Cagra.28200s0001 1.0kb upstream 1.0kb upstream 2418 true Scaffold28200: 1-2418 Capsella grandiflora
Cagra.28200s0001 1.0kb upstream 1.0kb upstream 580 false Scaffold28200: 1-580 Capsella grandiflora
Cagra.28200s0001 1.0kb downstream 1.0kb downstream 2838 true Scaffold28200: 581-3418 Capsella grandiflora
Cagra.28200s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold28200: 2419-3418 Capsella grandiflora
Cagra.28200s0001 2.0kb upstream 2.0kb upstream 2418 true Scaffold28200: 1-2418 Capsella grandiflora
Cagra.28200s0001 2.0kb upstream 2.0kb upstream 580 false Scaffold28200: 1-580 Capsella grandiflora
Cagra.28200s0001 2.0kb downstream 2.0kb downstream 3838 true Scaffold28200: 581-4418 Capsella grandiflora
Cagra.28200s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold28200: 2419-4418 Capsella grandiflora
Cagra.28200s0001 5.0kb upstream 5.0kb upstream 2418 true Scaffold28200: 1-2418 Capsella grandiflora
Cagra.28200s0001 5.0kb upstream 5.0kb upstream 580 false Scaffold28200: 1-580 Capsella grandiflora
Cagra.28200s0001 5.0kb downstream 5.0kb downstream 6838 true Scaffold28200: 581-7418 Capsella grandiflora
Cagra.28200s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold28200: 2419-7418 Capsella grandiflora
Cagra.28200s0001 10.0kb upstream 10.0kb upstream 2418 true Scaffold28200: 1-2418 Capsella grandiflora
Cagra.28200s0001 10.0kb upstream 10.0kb upstream 580 false Scaffold28200: 1-580 Capsella grandiflora
Cagra.28200s0001 10.0kb downstream 10.0kb downstream 9261 true Scaffold28200: 581-9841 Capsella grandiflora
Cagra.28200s0001 10.0kb downstream 10.0kb downstream 7423 false Scaffold28200: 2419-9841 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782986 5273 Angiosperm View MSA
122374959 5261 Brassicaceae View MSA
123800856 5264 Brassicales-Malvales View MSA
124298220 5266 SBM View MSA
124246597 5268 Malvidae View MSA
124070118 5270 Rosid View MSA
123754224 5271 Pentapetalae View MSA
122775615 5272 Eudicot View MSA
121054482 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain