Gene : Cagra.28108s0001 C. grandiflora v1.1
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1
Name:  ? Cagra.28108s0001 Secondary Identifier:  ? PAC:28897658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.28108s0001 0.5kb upstream 0.5kb upstream 1567 true Scaffold28108: 551-2117 Capsella grandiflora
Cagra.28108s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold28108: 551-1050 Capsella grandiflora
Cagra.28108s0001 0.5kb downstream 0.5kb downstream 1068 true Scaffold28108: 1051-2118 Capsella grandiflora
Cagra.28108s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold28108: 2118-2118 Capsella grandiflora
Cagra.28108s0001 1.0kb upstream 1.0kb upstream 2067 true Scaffold28108: 51-2117 Capsella grandiflora
Cagra.28108s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold28108: 51-1050 Capsella grandiflora
Cagra.28108s0001 1.0kb downstream 1.0kb downstream 1068 true Scaffold28108: 1051-2118 Capsella grandiflora
Cagra.28108s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold28108: 2118-2118 Capsella grandiflora
Cagra.28108s0001 2.0kb upstream 2.0kb upstream 2117 true Scaffold28108: 1-2117 Capsella grandiflora
Cagra.28108s0001 2.0kb upstream 2.0kb upstream 1050 false Scaffold28108: 1-1050 Capsella grandiflora
Cagra.28108s0001 2.0kb downstream 2.0kb downstream 1068 true Scaffold28108: 1051-2118 Capsella grandiflora
Cagra.28108s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold28108: 2118-2118 Capsella grandiflora
Cagra.28108s0001 5.0kb upstream 5.0kb upstream 2117 true Scaffold28108: 1-2117 Capsella grandiflora
Cagra.28108s0001 5.0kb upstream 5.0kb upstream 1050 false Scaffold28108: 1-1050 Capsella grandiflora
Cagra.28108s0001 5.0kb downstream 5.0kb downstream 1068 true Scaffold28108: 1051-2118 Capsella grandiflora
Cagra.28108s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold28108: 2118-2118 Capsella grandiflora
Cagra.28108s0001 10.0kb upstream 10.0kb upstream 2117 true Scaffold28108: 1-2117 Capsella grandiflora
Cagra.28108s0001 10.0kb upstream 10.0kb upstream 1050 false Scaffold28108: 1-1050 Capsella grandiflora
Cagra.28108s0001 10.0kb downstream 10.0kb downstream 1068 true Scaffold28108: 1051-2118 Capsella grandiflora
Cagra.28108s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold28108: 2118-2118 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367821 5261 Brassicaceae View MSA
123838433 5264 Brassicales-Malvales View MSA
124346422 5266 SBM View MSA
124253833 5268 Malvidae View MSA
124061811 5270 Rosid View MSA
123749881 5271 Pentapetalae View MSA
122794470 5272 Eudicot View MSA
122042584 5273 Angiosperm View MSA
121347178 5274 Embryophyte View MSA
123380504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain