Gene : Cagra.29590s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31062:SF37 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 10-RELATED Genomic Order:  2
Name:  ? Cagra.29590s0002 Secondary Identifier:  ? PAC:28902519
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.29590s0002 0.5kb upstream 0.5kb upstream 1667 true Scaffold29590: 5430-7096 Capsella grandiflora
Cagra.29590s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold29590: 6597-7096 Capsella grandiflora
Cagra.29590s0002 0.5kb downstream 0.5kb downstream 1667 true Scaffold29590: 4930-6596 Capsella grandiflora
Cagra.29590s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold29590: 4930-5429 Capsella grandiflora
Cagra.29590s0002 1.0kb upstream 1.0kb upstream 2167 true Scaffold29590: 5430-7596 Capsella grandiflora
Cagra.29590s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold29590: 6597-7596 Capsella grandiflora
Cagra.29590s0002 1.0kb downstream 1.0kb downstream 2167 true Scaffold29590: 4430-6596 Capsella grandiflora
Cagra.29590s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold29590: 4430-5429 Capsella grandiflora
Cagra.29590s0002 2.0kb upstream 2.0kb upstream 3167 true Scaffold29590: 5430-8596 Capsella grandiflora
Cagra.29590s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold29590: 6597-8596 Capsella grandiflora
Cagra.29590s0002 2.0kb downstream 2.0kb downstream 3167 true Scaffold29590: 3430-6596 Capsella grandiflora
Cagra.29590s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold29590: 3430-5429 Capsella grandiflora
Cagra.29590s0002 5.0kb upstream 5.0kb upstream 3459 true Scaffold29590: 5430-8888 Capsella grandiflora
Cagra.29590s0002 5.0kb upstream 5.0kb upstream 2292 false Scaffold29590: 6597-8888 Capsella grandiflora
Cagra.29590s0002 5.0kb downstream 5.0kb downstream 6167 true Scaffold29590: 430-6596 Capsella grandiflora
Cagra.29590s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold29590: 430-5429 Capsella grandiflora
Cagra.29590s0002 10.0kb upstream 10.0kb upstream 3459 true Scaffold29590: 5430-8888 Capsella grandiflora
Cagra.29590s0002 10.0kb upstream 10.0kb upstream 2292 false Scaffold29590: 6597-8888 Capsella grandiflora
Cagra.29590s0002 10.0kb downstream 10.0kb downstream 6596 true Scaffold29590: 1-6596 Capsella grandiflora
Cagra.29590s0002 10.0kb downstream 10.0kb downstream 5429 false Scaffold29590: 1-5429 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368411 5261 Brassicaceae View MSA
123827506 5264 Brassicales-Malvales View MSA
124341849 5266 SBM View MSA
124239964 5268 Malvidae View MSA
124063882 5270 Rosid View MSA
123746772 5271 Pentapetalae View MSA
122790854 5272 Eudicot View MSA
122043588 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain