Gene : Cagra.25489s0008 C. grandiflora v1.1
Defline:  (1 of 5) PTHR24096:SF186 - 4-COUMARATE--COA LIGASE-LIKE 2-RELATED Genomic Order:  8
Name:  ? Cagra.25489s0008 Secondary Identifier:  ? PAC:28897857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.25489s0008 0.5kb upstream 0.5kb upstream 2809 true Scaffold25489: 18935-21743 Capsella grandiflora
Cagra.25489s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold25489: 21244-21743 Capsella grandiflora
Cagra.25489s0008 0.5kb downstream 0.5kb downstream 2809 true Scaffold25489: 18435-21243 Capsella grandiflora
Cagra.25489s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold25489: 18435-18934 Capsella grandiflora
Cagra.25489s0008 1.0kb upstream 1.0kb upstream 3309 true Scaffold25489: 18935-22243 Capsella grandiflora
Cagra.25489s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold25489: 21244-22243 Capsella grandiflora
Cagra.25489s0008 1.0kb downstream 1.0kb downstream 3309 true Scaffold25489: 17935-21243 Capsella grandiflora
Cagra.25489s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold25489: 17935-18934 Capsella grandiflora
Cagra.25489s0008 2.0kb upstream 2.0kb upstream 4309 true Scaffold25489: 18935-23243 Capsella grandiflora
Cagra.25489s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold25489: 21244-23243 Capsella grandiflora
Cagra.25489s0008 2.0kb downstream 2.0kb downstream 4309 true Scaffold25489: 16935-21243 Capsella grandiflora
Cagra.25489s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold25489: 16935-18934 Capsella grandiflora
Cagra.25489s0008 5.0kb upstream 5.0kb upstream 7309 true Scaffold25489: 18935-26243 Capsella grandiflora
Cagra.25489s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold25489: 21244-26243 Capsella grandiflora
Cagra.25489s0008 5.0kb downstream 5.0kb downstream 7309 true Scaffold25489: 13935-21243 Capsella grandiflora
Cagra.25489s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold25489: 13935-18934 Capsella grandiflora
Cagra.25489s0008 10.0kb upstream 10.0kb upstream 10487 true Scaffold25489: 18935-29421 Capsella grandiflora
Cagra.25489s0008 10.0kb upstream 10.0kb upstream 8178 false Scaffold25489: 21244-29421 Capsella grandiflora
Cagra.25489s0008 10.0kb downstream 10.0kb downstream 12309 true Scaffold25489: 8935-21243 Capsella grandiflora
Cagra.25489s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold25489: 8935-18934 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374067 5261 Brassicaceae View MSA
123841176 5264 Brassicales-Malvales View MSA
124344613 5266 SBM View MSA
124237621 5268 Malvidae View MSA
124062315 5270 Rosid View MSA
123736531 5271 Pentapetalae View MSA
122785928 5272 Eudicot View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain