Gene : Cagra.25895s0001 C. grandiflora v1.1

Defline:  (1 of 1) K12125 - protein EARLY FLOWERING 3 Genomic Order:  1
Name:  ? Cagra.25895s0001 Secondary Identifier:  ? PAC:28906765

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.25895s0001 0.5kb upstream 0.5kb upstream 4293 true Scaffold25895: 1-4293 Capsella grandiflora
Cagra.25895s0001 0.5kb upstream 0.5kb upstream 233 false Scaffold25895: 1-233 Capsella grandiflora
Cagra.25895s0001 0.5kb downstream 0.5kb downstream 4560 true Scaffold25895: 234-4793 Capsella grandiflora
Cagra.25895s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold25895: 4294-4793 Capsella grandiflora
Cagra.25895s0001 1.0kb upstream 1.0kb upstream 4293 true Scaffold25895: 1-4293 Capsella grandiflora
Cagra.25895s0001 1.0kb upstream 1.0kb upstream 233 false Scaffold25895: 1-233 Capsella grandiflora
Cagra.25895s0001 1.0kb downstream 1.0kb downstream 5060 true Scaffold25895: 234-5293 Capsella grandiflora
Cagra.25895s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold25895: 4294-5293 Capsella grandiflora
Cagra.25895s0001 2.0kb upstream 2.0kb upstream 4293 true Scaffold25895: 1-4293 Capsella grandiflora
Cagra.25895s0001 2.0kb upstream 2.0kb upstream 233 false Scaffold25895: 1-233 Capsella grandiflora
Cagra.25895s0001 2.0kb downstream 2.0kb downstream 6060 true Scaffold25895: 234-6293 Capsella grandiflora
Cagra.25895s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold25895: 4294-6293 Capsella grandiflora
Cagra.25895s0001 5.0kb upstream 5.0kb upstream 4293 true Scaffold25895: 1-4293 Capsella grandiflora
Cagra.25895s0001 5.0kb upstream 5.0kb upstream 233 false Scaffold25895: 1-233 Capsella grandiflora
Cagra.25895s0001 5.0kb downstream 5.0kb downstream 7531 true Scaffold25895: 234-7764 Capsella grandiflora
Cagra.25895s0001 5.0kb downstream 5.0kb downstream 3471 false Scaffold25895: 4294-7764 Capsella grandiflora
Cagra.25895s0001 10.0kb upstream 10.0kb upstream 4293 true Scaffold25895: 1-4293 Capsella grandiflora
Cagra.25895s0001 10.0kb upstream 10.0kb upstream 233 false Scaffold25895: 1-233 Capsella grandiflora
Cagra.25895s0001 10.0kb downstream 10.0kb downstream 7531 true Scaffold25895: 234-7764 Capsella grandiflora
Cagra.25895s0001 10.0kb downstream 10.0kb downstream 3471 false Scaffold25895: 4294-7764 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363709 5261 Brassicaceae View MSA
123840062 5264 Brassicales-Malvales View MSA
124342401 5266 SBM View MSA
124242705 5268 Malvidae View MSA
124071157 5270 Rosid View MSA
123751825 5271 Pentapetalae View MSA
122796680 5272 Eudicot View MSA
122044272 5273 Angiosperm View MSA
121350755 5274 Embryophyte View MSA
123381878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain