Gene : Cagra.25917s0006 C. grandiflora v1.1
Defline:  (1 of 3) PF04718 - Mitochondrial ATP synthase g subunit (ATP-synt_G) Genomic Order:  6
Name:  ? Cagra.25917s0006 Secondary Identifier:  ? PAC:28917418
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.25917s0006 0.5kb upstream 0.5kb upstream 2116 true Scaffold25917: 12956-15071 Capsella grandiflora
Cagra.25917s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold25917: 12956-13455 Capsella grandiflora
Cagra.25917s0006 0.5kb downstream 0.5kb downstream 2116 true Scaffold25917: 13456-15571 Capsella grandiflora
Cagra.25917s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold25917: 15072-15571 Capsella grandiflora
Cagra.25917s0006 1.0kb upstream 1.0kb upstream 2616 true Scaffold25917: 12456-15071 Capsella grandiflora
Cagra.25917s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold25917: 12456-13455 Capsella grandiflora
Cagra.25917s0006 1.0kb downstream 1.0kb downstream 2616 true Scaffold25917: 13456-16071 Capsella grandiflora
Cagra.25917s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold25917: 15072-16071 Capsella grandiflora
Cagra.25917s0006 2.0kb upstream 2.0kb upstream 3616 true Scaffold25917: 11456-15071 Capsella grandiflora
Cagra.25917s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold25917: 11456-13455 Capsella grandiflora
Cagra.25917s0006 2.0kb downstream 2.0kb downstream 3616 true Scaffold25917: 13456-17071 Capsella grandiflora
Cagra.25917s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold25917: 15072-17071 Capsella grandiflora
Cagra.25917s0006 5.0kb upstream 5.0kb upstream 6616 true Scaffold25917: 8456-15071 Capsella grandiflora
Cagra.25917s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold25917: 8456-13455 Capsella grandiflora
Cagra.25917s0006 5.0kb downstream 5.0kb downstream 6616 true Scaffold25917: 13456-20071 Capsella grandiflora
Cagra.25917s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold25917: 15072-20071 Capsella grandiflora
Cagra.25917s0006 10.0kb upstream 10.0kb upstream 11616 true Scaffold25917: 3456-15071 Capsella grandiflora
Cagra.25917s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold25917: 3456-13455 Capsella grandiflora
Cagra.25917s0006 10.0kb downstream 10.0kb downstream 11616 true Scaffold25917: 13456-25071 Capsella grandiflora
Cagra.25917s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold25917: 15072-25071 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377026 5261 Brassicaceae View MSA
123801418 5264 Brassicales-Malvales View MSA
124346729 5266 SBM View MSA
124244909 5268 Malvidae View MSA
124061170 5270 Rosid View MSA
123750868 5271 Pentapetalae View MSA
122796122 5272 Eudicot View MSA
122043209 5273 Angiosperm View MSA
121346657 5274 Embryophyte View MSA
123428530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain