Gene : Cagra.26461s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11594:SF5 - 40S RIBOSOMAL PROTEIN S27-RELATED Genomic Order:  1
Name:  ? Cagra.26461s0001 Secondary Identifier:  ? PAC:28899395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.26461s0001 0.5kb upstream 0.5kb upstream 2972 true Scaffold26461: 2182-5153 Capsella grandiflora
Cagra.26461s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold26461: 4654-5153 Capsella grandiflora
Cagra.26461s0001 0.5kb downstream 0.5kb downstream 2972 true Scaffold26461: 1682-4653 Capsella grandiflora
Cagra.26461s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold26461: 1682-2181 Capsella grandiflora
Cagra.26461s0001 1.0kb upstream 1.0kb upstream 3472 true Scaffold26461: 2182-5653 Capsella grandiflora
Cagra.26461s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold26461: 4654-5653 Capsella grandiflora
Cagra.26461s0001 1.0kb downstream 1.0kb downstream 3472 true Scaffold26461: 1182-4653 Capsella grandiflora
Cagra.26461s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold26461: 1182-2181 Capsella grandiflora
Cagra.26461s0001 2.0kb upstream 2.0kb upstream 4472 true Scaffold26461: 2182-6653 Capsella grandiflora
Cagra.26461s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold26461: 4654-6653 Capsella grandiflora
Cagra.26461s0001 2.0kb downstream 2.0kb downstream 4472 true Scaffold26461: 182-4653 Capsella grandiflora
Cagra.26461s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold26461: 182-2181 Capsella grandiflora
Cagra.26461s0001 5.0kb upstream 5.0kb upstream 4521 true Scaffold26461: 2182-6702 Capsella grandiflora
Cagra.26461s0001 5.0kb upstream 5.0kb upstream 2049 false Scaffold26461: 4654-6702 Capsella grandiflora
Cagra.26461s0001 5.0kb downstream 5.0kb downstream 4653 true Scaffold26461: 1-4653 Capsella grandiflora
Cagra.26461s0001 5.0kb downstream 5.0kb downstream 2181 false Scaffold26461: 1-2181 Capsella grandiflora
Cagra.26461s0001 10.0kb upstream 10.0kb upstream 4521 true Scaffold26461: 2182-6702 Capsella grandiflora
Cagra.26461s0001 10.0kb upstream 10.0kb upstream 2049 false Scaffold26461: 4654-6702 Capsella grandiflora
Cagra.26461s0001 10.0kb downstream 10.0kb downstream 4653 true Scaffold26461: 1-4653 Capsella grandiflora
Cagra.26461s0001 10.0kb downstream 10.0kb downstream 2181 false Scaffold26461: 1-2181 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122381428 5261 Brassicaceae View MSA
123839570 5264 Brassicales-Malvales View MSA
124341747 5266 SBM View MSA
124240945 5268 Malvidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain