Gene : Cagra.27042s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10724 - S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  2
Name:  ? Cagra.27042s0002 Secondary Identifier:  ? PAC:28912349
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.27042s0002 0.5kb upstream 0.5kb upstream 2552 true Scaffold27042: 3656-6207 Capsella grandiflora
Cagra.27042s0002 0.5kb upstream 0.5kb upstream 381 false Scaffold27042: 5827-6207 Capsella grandiflora
Cagra.27042s0002 0.5kb downstream 0.5kb downstream 2671 true Scaffold27042: 3156-5826 Capsella grandiflora
Cagra.27042s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold27042: 3156-3655 Capsella grandiflora
Cagra.27042s0002 1.0kb upstream 1.0kb upstream 2552 true Scaffold27042: 3656-6207 Capsella grandiflora
Cagra.27042s0002 1.0kb upstream 1.0kb upstream 381 false Scaffold27042: 5827-6207 Capsella grandiflora
Cagra.27042s0002 1.0kb downstream 1.0kb downstream 3171 true Scaffold27042: 2656-5826 Capsella grandiflora
Cagra.27042s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold27042: 2656-3655 Capsella grandiflora
Cagra.27042s0002 2.0kb upstream 2.0kb upstream 2552 true Scaffold27042: 3656-6207 Capsella grandiflora
Cagra.27042s0002 2.0kb upstream 2.0kb upstream 381 false Scaffold27042: 5827-6207 Capsella grandiflora
Cagra.27042s0002 2.0kb downstream 2.0kb downstream 4171 true Scaffold27042: 1656-5826 Capsella grandiflora
Cagra.27042s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold27042: 1656-3655 Capsella grandiflora
Cagra.27042s0002 5.0kb upstream 5.0kb upstream 2552 true Scaffold27042: 3656-6207 Capsella grandiflora
Cagra.27042s0002 5.0kb upstream 5.0kb upstream 381 false Scaffold27042: 5827-6207 Capsella grandiflora
Cagra.27042s0002 5.0kb downstream 5.0kb downstream 5826 true Scaffold27042: 1-5826 Capsella grandiflora
Cagra.27042s0002 5.0kb downstream 5.0kb downstream 3655 false Scaffold27042: 1-3655 Capsella grandiflora
Cagra.27042s0002 10.0kb upstream 10.0kb upstream 2552 true Scaffold27042: 3656-6207 Capsella grandiflora
Cagra.27042s0002 10.0kb upstream 10.0kb upstream 381 false Scaffold27042: 5827-6207 Capsella grandiflora
Cagra.27042s0002 10.0kb downstream 10.0kb downstream 5826 true Scaffold27042: 1-5826 Capsella grandiflora
Cagra.27042s0002 10.0kb downstream 10.0kb downstream 3655 false Scaffold27042: 1-3655 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378144 5261 Brassicaceae View MSA
123830886 5264 Brassicales-Malvales View MSA
124337218 5266 SBM View MSA
124242595 5268 Malvidae View MSA
124061021 5270 Rosid View MSA
123748044 5271 Pentapetalae View MSA
122788997 5272 Eudicot View MSA
122042339 5273 Angiosperm View MSA
121347373 5274 Embryophyte View MSA
123425881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain