Gene : Cagra.27358s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31852:SF17 - EXPRESSED PROTEIN Genomic Order:  1
Name:  ? Cagra.27358s0001 Secondary Identifier:  ? PAC:28895285
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.27358s0001 0.5kb upstream 0.5kb upstream 1281 true Scaffold27358: 22-1302 Capsella grandiflora
Cagra.27358s0001 0.5kb upstream 0.5kb upstream 384 false Scaffold27358: 919-1302 Capsella grandiflora
Cagra.27358s0001 0.5kb downstream 0.5kb downstream 918 true Scaffold27358: 1-918 Capsella grandiflora
Cagra.27358s0001 0.5kb downstream 0.5kb downstream 21 false Scaffold27358: 1-21 Capsella grandiflora
Cagra.27358s0001 1.0kb upstream 1.0kb upstream 1281 true Scaffold27358: 22-1302 Capsella grandiflora
Cagra.27358s0001 1.0kb upstream 1.0kb upstream 384 false Scaffold27358: 919-1302 Capsella grandiflora
Cagra.27358s0001 1.0kb downstream 1.0kb downstream 918 true Scaffold27358: 1-918 Capsella grandiflora
Cagra.27358s0001 1.0kb downstream 1.0kb downstream 21 false Scaffold27358: 1-21 Capsella grandiflora
Cagra.27358s0001 2.0kb upstream 2.0kb upstream 1281 true Scaffold27358: 22-1302 Capsella grandiflora
Cagra.27358s0001 2.0kb upstream 2.0kb upstream 384 false Scaffold27358: 919-1302 Capsella grandiflora
Cagra.27358s0001 2.0kb downstream 2.0kb downstream 918 true Scaffold27358: 1-918 Capsella grandiflora
Cagra.27358s0001 2.0kb downstream 2.0kb downstream 21 false Scaffold27358: 1-21 Capsella grandiflora
Cagra.27358s0001 5.0kb upstream 5.0kb upstream 1281 true Scaffold27358: 22-1302 Capsella grandiflora
Cagra.27358s0001 5.0kb upstream 5.0kb upstream 384 false Scaffold27358: 919-1302 Capsella grandiflora
Cagra.27358s0001 5.0kb downstream 5.0kb downstream 918 true Scaffold27358: 1-918 Capsella grandiflora
Cagra.27358s0001 5.0kb downstream 5.0kb downstream 21 false Scaffold27358: 1-21 Capsella grandiflora
Cagra.27358s0001 10.0kb upstream 10.0kb upstream 1281 true Scaffold27358: 22-1302 Capsella grandiflora
Cagra.27358s0001 10.0kb upstream 10.0kb upstream 384 false Scaffold27358: 919-1302 Capsella grandiflora
Cagra.27358s0001 10.0kb downstream 10.0kb downstream 918 true Scaffold27358: 1-918 Capsella grandiflora
Cagra.27358s0001 10.0kb downstream 10.0kb downstream 21 false Scaffold27358: 1-21 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379796 5261 Brassicaceae View MSA
123837924 5264 Brassicales-Malvales View MSA
124349389 5266 SBM View MSA
124246401 5268 Malvidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain