Gene : Cagra.23907s0008 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.23907s0008 Secondary Identifier:  ? PAC:28913571
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.23907s0008 0.5kb upstream 0.5kb upstream 2604 true Scaffold23907: 31033-33636 Capsella grandiflora
Cagra.23907s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold23907: 33137-33636 Capsella grandiflora
Cagra.23907s0008 0.5kb downstream 0.5kb downstream 2604 true Scaffold23907: 30533-33136 Capsella grandiflora
Cagra.23907s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold23907: 30533-31032 Capsella grandiflora
Cagra.23907s0008 1.0kb upstream 1.0kb upstream 3104 true Scaffold23907: 31033-34136 Capsella grandiflora
Cagra.23907s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold23907: 33137-34136 Capsella grandiflora
Cagra.23907s0008 1.0kb downstream 1.0kb downstream 3104 true Scaffold23907: 30033-33136 Capsella grandiflora
Cagra.23907s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold23907: 30033-31032 Capsella grandiflora
Cagra.23907s0008 2.0kb upstream 2.0kb upstream 4104 true Scaffold23907: 31033-35136 Capsella grandiflora
Cagra.23907s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold23907: 33137-35136 Capsella grandiflora
Cagra.23907s0008 2.0kb downstream 2.0kb downstream 4104 true Scaffold23907: 29033-33136 Capsella grandiflora
Cagra.23907s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold23907: 29033-31032 Capsella grandiflora
Cagra.23907s0008 5.0kb upstream 5.0kb upstream 7104 true Scaffold23907: 31033-38136 Capsella grandiflora
Cagra.23907s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold23907: 33137-38136 Capsella grandiflora
Cagra.23907s0008 5.0kb downstream 5.0kb downstream 7104 true Scaffold23907: 26033-33136 Capsella grandiflora
Cagra.23907s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold23907: 26033-31032 Capsella grandiflora
Cagra.23907s0008 10.0kb upstream 10.0kb upstream 12104 true Scaffold23907: 31033-43136 Capsella grandiflora
Cagra.23907s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold23907: 33137-43136 Capsella grandiflora
Cagra.23907s0008 10.0kb downstream 10.0kb downstream 12104 true Scaffold23907: 21033-33136 Capsella grandiflora
Cagra.23907s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold23907: 21033-31032 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363938 5261 Brassicaceae View MSA
123798651 5264 Brassicales-Malvales View MSA
124349690 5266 SBM View MSA
124251939 5268 Malvidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain