Gene : Cagra.23907s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11361:SF34 - DNA MISMATCH REPAIR PROTEIN MSH3 Genomic Order:  12
Name:  ? Cagra.23907s0012 Secondary Identifier:  ? PAC:28913575
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.23907s0012 0.5kb upstream 0.5kb upstream 6114 true Scaffold23907: 41559-47672 Capsella grandiflora
Cagra.23907s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold23907: 41559-42058 Capsella grandiflora
Cagra.23907s0012 0.5kb downstream 0.5kb downstream 6114 true Scaffold23907: 42059-48172 Capsella grandiflora
Cagra.23907s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold23907: 47673-48172 Capsella grandiflora
Cagra.23907s0012 1.0kb upstream 1.0kb upstream 6614 true Scaffold23907: 41059-47672 Capsella grandiflora
Cagra.23907s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold23907: 41059-42058 Capsella grandiflora
Cagra.23907s0012 1.0kb downstream 1.0kb downstream 6614 true Scaffold23907: 42059-48672 Capsella grandiflora
Cagra.23907s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold23907: 47673-48672 Capsella grandiflora
Cagra.23907s0012 2.0kb upstream 2.0kb upstream 7614 true Scaffold23907: 40059-47672 Capsella grandiflora
Cagra.23907s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold23907: 40059-42058 Capsella grandiflora
Cagra.23907s0012 2.0kb downstream 2.0kb downstream 7614 true Scaffold23907: 42059-49672 Capsella grandiflora
Cagra.23907s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold23907: 47673-49672 Capsella grandiflora
Cagra.23907s0012 5.0kb upstream 5.0kb upstream 10614 true Scaffold23907: 37059-47672 Capsella grandiflora
Cagra.23907s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold23907: 37059-42058 Capsella grandiflora
Cagra.23907s0012 5.0kb downstream 5.0kb downstream 10614 true Scaffold23907: 42059-52672 Capsella grandiflora
Cagra.23907s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold23907: 47673-52672 Capsella grandiflora
Cagra.23907s0012 10.0kb upstream 10.0kb upstream 15614 true Scaffold23907: 32059-47672 Capsella grandiflora
Cagra.23907s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold23907: 32059-42058 Capsella grandiflora
Cagra.23907s0012 10.0kb downstream 10.0kb downstream 15614 true Scaffold23907: 42059-57672 Capsella grandiflora
Cagra.23907s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold23907: 47673-57672 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371810 5261 Brassicaceae View MSA
123829989 5264 Brassicales-Malvales View MSA
124340255 5266 SBM View MSA
124240646 5268 Malvidae View MSA
124067254 5270 Rosid View MSA
123737421 5271 Pentapetalae View MSA
122792724 5272 Eudicot View MSA
122046515 5273 Angiosperm View MSA
121349406 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain