Gene : Cagra.10374s0001 C. grandiflora v1.1
Defline:  (1 of 12) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1
Name:  ? Cagra.10374s0001 Secondary Identifier:  ? PAC:28900799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.10374s0001 0.5kb upstream 0.5kb upstream 2824 true Scaffold10374: 3888-6711 Capsella grandiflora
Cagra.10374s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold10374: 3888-4387 Capsella grandiflora
Cagra.10374s0001 0.5kb downstream 0.5kb downstream 2824 true Scaffold10374: 4388-7211 Capsella grandiflora
Cagra.10374s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold10374: 6712-7211 Capsella grandiflora
Cagra.10374s0001 1.0kb upstream 1.0kb upstream 3324 true Scaffold10374: 3388-6711 Capsella grandiflora
Cagra.10374s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold10374: 3388-4387 Capsella grandiflora
Cagra.10374s0001 1.0kb downstream 1.0kb downstream 3324 true Scaffold10374: 4388-7711 Capsella grandiflora
Cagra.10374s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold10374: 6712-7711 Capsella grandiflora
Cagra.10374s0001 2.0kb upstream 2.0kb upstream 4324 true Scaffold10374: 2388-6711 Capsella grandiflora
Cagra.10374s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold10374: 2388-4387 Capsella grandiflora
Cagra.10374s0001 2.0kb downstream 2.0kb downstream 4324 true Scaffold10374: 4388-8711 Capsella grandiflora
Cagra.10374s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold10374: 6712-8711 Capsella grandiflora
Cagra.10374s0001 5.0kb upstream 5.0kb upstream 6711 true Scaffold10374: 1-6711 Capsella grandiflora
Cagra.10374s0001 5.0kb upstream 5.0kb upstream 4387 false Scaffold10374: 1-4387 Capsella grandiflora
Cagra.10374s0001 5.0kb downstream 5.0kb downstream 7324 true Scaffold10374: 4388-11711 Capsella grandiflora
Cagra.10374s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold10374: 6712-11711 Capsella grandiflora
Cagra.10374s0001 10.0kb upstream 10.0kb upstream 6711 true Scaffold10374: 1-6711 Capsella grandiflora
Cagra.10374s0001 10.0kb upstream 10.0kb upstream 4387 false Scaffold10374: 1-4387 Capsella grandiflora
Cagra.10374s0001 10.0kb downstream 10.0kb downstream 9576 true Scaffold10374: 4388-13963 Capsella grandiflora
Cagra.10374s0001 10.0kb downstream 10.0kb downstream 7252 false Scaffold10374: 6712-13963 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366083 5261 Brassicaceae View MSA
123830245 5264 Brassicales-Malvales View MSA
124345150 5266 SBM View MSA
124245256 5268 Malvidae View MSA
124066700 5270 Rosid View MSA
123738261 5271 Pentapetalae View MSA
122794449 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain