Gene : Cagra.24344s0001 C. grandiflora v1.1
Defline:  (1 of 1) 2.6.1.5 - Tyrosine transaminase / Tyrosine aminotransferase Genomic Order:  1
Name:  ? Cagra.24344s0001 Secondary Identifier:  ? PAC:28915953
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5864 Capsella grandiflora pathologic  
Cgrandiflora PWY-5886 Capsella grandiflora pathologic  
Cgrandiflora TYRFUMCAT-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.24344s0001 0.5kb upstream 0.5kb upstream 1853 true Scaffold24344: 8-1860 Capsella grandiflora
Cagra.24344s0001 0.5kb upstream 0.5kb upstream 1 false Scaffold24344: 1860-1860 Capsella grandiflora
Cagra.24344s0001 0.5kb downstream 0.5kb downstream 1859 true Scaffold24344: 1-1859 Capsella grandiflora
Cagra.24344s0001 0.5kb downstream 0.5kb downstream 7 false Scaffold24344: 1-7 Capsella grandiflora
Cagra.24344s0001 1.0kb upstream 1.0kb upstream 1853 true Scaffold24344: 8-1860 Capsella grandiflora
Cagra.24344s0001 1.0kb upstream 1.0kb upstream 1 false Scaffold24344: 1860-1860 Capsella grandiflora
Cagra.24344s0001 1.0kb downstream 1.0kb downstream 1859 true Scaffold24344: 1-1859 Capsella grandiflora
Cagra.24344s0001 1.0kb downstream 1.0kb downstream 7 false Scaffold24344: 1-7 Capsella grandiflora
Cagra.24344s0001 2.0kb upstream 2.0kb upstream 1853 true Scaffold24344: 8-1860 Capsella grandiflora
Cagra.24344s0001 2.0kb upstream 2.0kb upstream 1 false Scaffold24344: 1860-1860 Capsella grandiflora
Cagra.24344s0001 2.0kb downstream 2.0kb downstream 1859 true Scaffold24344: 1-1859 Capsella grandiflora
Cagra.24344s0001 2.0kb downstream 2.0kb downstream 7 false Scaffold24344: 1-7 Capsella grandiflora
Cagra.24344s0001 5.0kb upstream 5.0kb upstream 1853 true Scaffold24344: 8-1860 Capsella grandiflora
Cagra.24344s0001 5.0kb upstream 5.0kb upstream 1 false Scaffold24344: 1860-1860 Capsella grandiflora
Cagra.24344s0001 5.0kb downstream 5.0kb downstream 1859 true Scaffold24344: 1-1859 Capsella grandiflora
Cagra.24344s0001 5.0kb downstream 5.0kb downstream 7 false Scaffold24344: 1-7 Capsella grandiflora
Cagra.24344s0001 10.0kb upstream 10.0kb upstream 1853 true Scaffold24344: 8-1860 Capsella grandiflora
Cagra.24344s0001 10.0kb upstream 10.0kb upstream 1 false Scaffold24344: 1860-1860 Capsella grandiflora
Cagra.24344s0001 10.0kb downstream 10.0kb downstream 1859 true Scaffold24344: 1-1859 Capsella grandiflora
Cagra.24344s0001 10.0kb downstream 10.0kb downstream 7 false Scaffold24344: 1-7 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364838 5261 Brassicaceae View MSA
123839473 5264 Brassicales-Malvales View MSA
124343296 5266 SBM View MSA
124252871 5268 Malvidae View MSA
124067351 5270 Rosid View MSA
123744303 5271 Pentapetalae View MSA
122795476 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain