Gene : Cagra.20943s0002 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31867:SF33 - EXPANSIN-A21-RELATED Genomic Order:  2
Name:  ? Cagra.20943s0002 Secondary Identifier:  ? PAC:28913874
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20943s0002 0.5kb upstream 0.5kb upstream 1479 true Scaffold20943: 2012-3490 Capsella grandiflora
Cagra.20943s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold20943: 2012-2511 Capsella grandiflora
Cagra.20943s0002 0.5kb downstream 0.5kb downstream 1479 true Scaffold20943: 2512-3990 Capsella grandiflora
Cagra.20943s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold20943: 3491-3990 Capsella grandiflora
Cagra.20943s0002 1.0kb upstream 1.0kb upstream 1979 true Scaffold20943: 1512-3490 Capsella grandiflora
Cagra.20943s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold20943: 1512-2511 Capsella grandiflora
Cagra.20943s0002 1.0kb downstream 1.0kb downstream 1979 true Scaffold20943: 2512-4490 Capsella grandiflora
Cagra.20943s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold20943: 3491-4490 Capsella grandiflora
Cagra.20943s0002 2.0kb upstream 2.0kb upstream 2979 true Scaffold20943: 512-3490 Capsella grandiflora
Cagra.20943s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold20943: 512-2511 Capsella grandiflora
Cagra.20943s0002 2.0kb downstream 2.0kb downstream 2979 true Scaffold20943: 2512-5490 Capsella grandiflora
Cagra.20943s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold20943: 3491-5490 Capsella grandiflora
Cagra.20943s0002 5.0kb upstream 5.0kb upstream 3490 true Scaffold20943: 1-3490 Capsella grandiflora
Cagra.20943s0002 5.0kb upstream 5.0kb upstream 2511 false Scaffold20943: 1-2511 Capsella grandiflora
Cagra.20943s0002 5.0kb downstream 5.0kb downstream 5979 true Scaffold20943: 2512-8490 Capsella grandiflora
Cagra.20943s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold20943: 3491-8490 Capsella grandiflora
Cagra.20943s0002 10.0kb upstream 10.0kb upstream 3490 true Scaffold20943: 1-3490 Capsella grandiflora
Cagra.20943s0002 10.0kb upstream 10.0kb upstream 2511 false Scaffold20943: 1-2511 Capsella grandiflora
Cagra.20943s0002 10.0kb downstream 10.0kb downstream 10979 true Scaffold20943: 2512-13490 Capsella grandiflora
Cagra.20943s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold20943: 3491-13490 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375659 5261 Brassicaceae View MSA
123838557 5264 Brassicales-Malvales View MSA
124341019 5266 SBM View MSA
124248969 5268 Malvidae View MSA
124064025 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain