Gene : Cagra.20992s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21654:SF19 - DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  2
Name:  ? Cagra.20992s0002 Secondary Identifier:  ? PAC:28893548
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20992s0002 0.5kb upstream 0.5kb upstream 3203 true Scaffold20992: 14171-17373 Capsella grandiflora
Cagra.20992s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold20992: 16874-17373 Capsella grandiflora
Cagra.20992s0002 0.5kb downstream 0.5kb downstream 3203 true Scaffold20992: 13671-16873 Capsella grandiflora
Cagra.20992s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold20992: 13671-14170 Capsella grandiflora
Cagra.20992s0002 1.0kb upstream 1.0kb upstream 3703 true Scaffold20992: 14171-17873 Capsella grandiflora
Cagra.20992s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold20992: 16874-17873 Capsella grandiflora
Cagra.20992s0002 1.0kb downstream 1.0kb downstream 3703 true Scaffold20992: 13171-16873 Capsella grandiflora
Cagra.20992s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold20992: 13171-14170 Capsella grandiflora
Cagra.20992s0002 2.0kb upstream 2.0kb upstream 4703 true Scaffold20992: 14171-18873 Capsella grandiflora
Cagra.20992s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold20992: 16874-18873 Capsella grandiflora
Cagra.20992s0002 2.0kb downstream 2.0kb downstream 4703 true Scaffold20992: 12171-16873 Capsella grandiflora
Cagra.20992s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold20992: 12171-14170 Capsella grandiflora
Cagra.20992s0002 5.0kb upstream 5.0kb upstream 5083 true Scaffold20992: 14171-19253 Capsella grandiflora
Cagra.20992s0002 5.0kb upstream 5.0kb upstream 2380 false Scaffold20992: 16874-19253 Capsella grandiflora
Cagra.20992s0002 5.0kb downstream 5.0kb downstream 7703 true Scaffold20992: 9171-16873 Capsella grandiflora
Cagra.20992s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold20992: 9171-14170 Capsella grandiflora
Cagra.20992s0002 10.0kb upstream 10.0kb upstream 5083 true Scaffold20992: 14171-19253 Capsella grandiflora
Cagra.20992s0002 10.0kb upstream 10.0kb upstream 2380 false Scaffold20992: 16874-19253 Capsella grandiflora
Cagra.20992s0002 10.0kb downstream 10.0kb downstream 12703 true Scaffold20992: 4171-16873 Capsella grandiflora
Cagra.20992s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold20992: 4171-14170 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373292 5261 Brassicaceae View MSA
123830221 5264 Brassicales-Malvales View MSA
124350091 5266 SBM View MSA
124247912 5268 Malvidae View MSA
124065678 5270 Rosid View MSA
123736758 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain