Gene : Cagra.21102s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11361:SF31 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  2
Name:  ? Cagra.21102s0002 Secondary Identifier:  ? PAC:28919016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21102s0002 0.5kb upstream 0.5kb upstream 6302 true Scaffold21102: 5713-12014 Capsella grandiflora
Cagra.21102s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold21102: 5713-6212 Capsella grandiflora
Cagra.21102s0002 0.5kb downstream 0.5kb downstream 6302 true Scaffold21102: 6213-12514 Capsella grandiflora
Cagra.21102s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold21102: 12015-12514 Capsella grandiflora
Cagra.21102s0002 1.0kb upstream 1.0kb upstream 6802 true Scaffold21102: 5213-12014 Capsella grandiflora
Cagra.21102s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold21102: 5213-6212 Capsella grandiflora
Cagra.21102s0002 1.0kb downstream 1.0kb downstream 6802 true Scaffold21102: 6213-13014 Capsella grandiflora
Cagra.21102s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold21102: 12015-13014 Capsella grandiflora
Cagra.21102s0002 2.0kb upstream 2.0kb upstream 7802 true Scaffold21102: 4213-12014 Capsella grandiflora
Cagra.21102s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold21102: 4213-6212 Capsella grandiflora
Cagra.21102s0002 2.0kb downstream 2.0kb downstream 7802 true Scaffold21102: 6213-14014 Capsella grandiflora
Cagra.21102s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold21102: 12015-14014 Capsella grandiflora
Cagra.21102s0002 5.0kb upstream 5.0kb upstream 10802 true Scaffold21102: 1213-12014 Capsella grandiflora
Cagra.21102s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold21102: 1213-6212 Capsella grandiflora
Cagra.21102s0002 5.0kb downstream 5.0kb downstream 10802 true Scaffold21102: 6213-17014 Capsella grandiflora
Cagra.21102s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold21102: 12015-17014 Capsella grandiflora
Cagra.21102s0002 10.0kb upstream 10.0kb upstream 12014 true Scaffold21102: 1-12014 Capsella grandiflora
Cagra.21102s0002 10.0kb upstream 10.0kb upstream 6212 false Scaffold21102: 1-6212 Capsella grandiflora
Cagra.21102s0002 10.0kb downstream 10.0kb downstream 11814 true Scaffold21102: 6213-18026 Capsella grandiflora
Cagra.21102s0002 10.0kb downstream 10.0kb downstream 6012 false Scaffold21102: 12015-18026 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046363 5273 Angiosperm View MSA
122368806 5261 Brassicaceae View MSA
123834733 5264 Brassicales-Malvales View MSA
124340424 5266 SBM View MSA
124240518 5268 Malvidae View MSA
124065685 5270 Rosid View MSA
123748625 5271 Pentapetalae View MSA
122788803 5272 Eudicot View MSA
121344642 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain