Gene : Cagra.21079s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR18937//PTHR18937:SF242 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  6
Name:  ? Cagra.21079s0006 Secondary Identifier:  ? PAC:28908473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21079s0006 0.5kb upstream 0.5kb upstream 2139 true Scaffold21079: 20333-22471 Capsella grandiflora
Cagra.21079s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold21079: 21972-22471 Capsella grandiflora
Cagra.21079s0006 0.5kb downstream 0.5kb downstream 2139 true Scaffold21079: 19833-21971 Capsella grandiflora
Cagra.21079s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold21079: 19833-20332 Capsella grandiflora
Cagra.21079s0006 1.0kb upstream 1.0kb upstream 2639 true Scaffold21079: 20333-22971 Capsella grandiflora
Cagra.21079s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold21079: 21972-22971 Capsella grandiflora
Cagra.21079s0006 1.0kb downstream 1.0kb downstream 2639 true Scaffold21079: 19333-21971 Capsella grandiflora
Cagra.21079s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold21079: 19333-20332 Capsella grandiflora
Cagra.21079s0006 2.0kb upstream 2.0kb upstream 3639 true Scaffold21079: 20333-23971 Capsella grandiflora
Cagra.21079s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold21079: 21972-23971 Capsella grandiflora
Cagra.21079s0006 2.0kb downstream 2.0kb downstream 3639 true Scaffold21079: 18333-21971 Capsella grandiflora
Cagra.21079s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold21079: 18333-20332 Capsella grandiflora
Cagra.21079s0006 5.0kb upstream 5.0kb upstream 6639 true Scaffold21079: 20333-26971 Capsella grandiflora
Cagra.21079s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold21079: 21972-26971 Capsella grandiflora
Cagra.21079s0006 5.0kb downstream 5.0kb downstream 6639 true Scaffold21079: 15333-21971 Capsella grandiflora
Cagra.21079s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold21079: 15333-20332 Capsella grandiflora
Cagra.21079s0006 10.0kb upstream 10.0kb upstream 11639 true Scaffold21079: 20333-31971 Capsella grandiflora
Cagra.21079s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold21079: 21972-31971 Capsella grandiflora
Cagra.21079s0006 10.0kb downstream 10.0kb downstream 11639 true Scaffold21079: 10333-21971 Capsella grandiflora
Cagra.21079s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold21079: 10333-20332 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379011 5261 Brassicaceae View MSA
123836676 5264 Brassicales-Malvales View MSA
124339330 5266 SBM View MSA
124239098 5268 Malvidae View MSA
124068005 5270 Rosid View MSA
123750938 5271 Pentapetalae View MSA
122794865 5272 Eudicot View MSA
122042707 5273 Angiosperm View MSA
121310005 5274 Embryophyte View MSA
123347612 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain