Gene : Cagra.21433s0002 C. grandiflora v1.1
Defline:  (1 of 10) PTHR31470:SF13 - CYSTEINE PROTEINASE-LIKE PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.21433s0002 Secondary Identifier:  ? PAC:28906763
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21433s0002 0.5kb upstream 0.5kb upstream 3496 true Scaffold21433: 1128-4623 Capsella grandiflora
Cagra.21433s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold21433: 4124-4623 Capsella grandiflora
Cagra.21433s0002 0.5kb downstream 0.5kb downstream 3496 true Scaffold21433: 628-4123 Capsella grandiflora
Cagra.21433s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold21433: 628-1127 Capsella grandiflora
Cagra.21433s0002 1.0kb upstream 1.0kb upstream 3578 true Scaffold21433: 1128-4705 Capsella grandiflora
Cagra.21433s0002 1.0kb upstream 1.0kb upstream 582 false Scaffold21433: 4124-4705 Capsella grandiflora
Cagra.21433s0002 1.0kb downstream 1.0kb downstream 3996 true Scaffold21433: 128-4123 Capsella grandiflora
Cagra.21433s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold21433: 128-1127 Capsella grandiflora
Cagra.21433s0002 2.0kb upstream 2.0kb upstream 3578 true Scaffold21433: 1128-4705 Capsella grandiflora
Cagra.21433s0002 2.0kb upstream 2.0kb upstream 582 false Scaffold21433: 4124-4705 Capsella grandiflora
Cagra.21433s0002 2.0kb downstream 2.0kb downstream 4123 true Scaffold21433: 1-4123 Capsella grandiflora
Cagra.21433s0002 2.0kb downstream 2.0kb downstream 1127 false Scaffold21433: 1-1127 Capsella grandiflora
Cagra.21433s0002 5.0kb upstream 5.0kb upstream 3578 true Scaffold21433: 1128-4705 Capsella grandiflora
Cagra.21433s0002 5.0kb upstream 5.0kb upstream 582 false Scaffold21433: 4124-4705 Capsella grandiflora
Cagra.21433s0002 5.0kb downstream 5.0kb downstream 4123 true Scaffold21433: 1-4123 Capsella grandiflora
Cagra.21433s0002 5.0kb downstream 5.0kb downstream 1127 false Scaffold21433: 1-1127 Capsella grandiflora
Cagra.21433s0002 10.0kb upstream 10.0kb upstream 3578 true Scaffold21433: 1128-4705 Capsella grandiflora
Cagra.21433s0002 10.0kb upstream 10.0kb upstream 582 false Scaffold21433: 4124-4705 Capsella grandiflora
Cagra.21433s0002 10.0kb downstream 10.0kb downstream 4123 true Scaffold21433: 1-4123 Capsella grandiflora
Cagra.21433s0002 10.0kb downstream 10.0kb downstream 1127 false Scaffold21433: 1-1127 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780384 5273 Angiosperm View MSA
122382092 5261 Brassicaceae View MSA
123803660 5264 Brassicales-Malvales View MSA
124300748 5266 SBM View MSA
124151861 5268 Malvidae View MSA
123877201 5270 Rosid View MSA
123746084 5271 Pentapetalae View MSA
122771766 5272 Eudicot View MSA
121051999 5274 Embryophyte View MSA
123092063 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain