Gene : Cagra.21692s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 Genomic Order:  1
Name:  ? Cagra.21692s0001 Secondary Identifier:  ? PAC:28916654
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21692s0001 0.5kb upstream 0.5kb upstream 2956 true Scaffold21692: 85-3040 Capsella grandiflora
Cagra.21692s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold21692: 3039-3040 Capsella grandiflora
Cagra.21692s0001 0.5kb downstream 0.5kb downstream 3038 true Scaffold21692: 1-3038 Capsella grandiflora
Cagra.21692s0001 0.5kb downstream 0.5kb downstream 84 false Scaffold21692: 1-84 Capsella grandiflora
Cagra.21692s0001 1.0kb upstream 1.0kb upstream 2956 true Scaffold21692: 85-3040 Capsella grandiflora
Cagra.21692s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold21692: 3039-3040 Capsella grandiflora
Cagra.21692s0001 1.0kb downstream 1.0kb downstream 3038 true Scaffold21692: 1-3038 Capsella grandiflora
Cagra.21692s0001 1.0kb downstream 1.0kb downstream 84 false Scaffold21692: 1-84 Capsella grandiflora
Cagra.21692s0001 2.0kb upstream 2.0kb upstream 2956 true Scaffold21692: 85-3040 Capsella grandiflora
Cagra.21692s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold21692: 3039-3040 Capsella grandiflora
Cagra.21692s0001 2.0kb downstream 2.0kb downstream 3038 true Scaffold21692: 1-3038 Capsella grandiflora
Cagra.21692s0001 2.0kb downstream 2.0kb downstream 84 false Scaffold21692: 1-84 Capsella grandiflora
Cagra.21692s0001 5.0kb upstream 5.0kb upstream 2956 true Scaffold21692: 85-3040 Capsella grandiflora
Cagra.21692s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold21692: 3039-3040 Capsella grandiflora
Cagra.21692s0001 5.0kb downstream 5.0kb downstream 3038 true Scaffold21692: 1-3038 Capsella grandiflora
Cagra.21692s0001 5.0kb downstream 5.0kb downstream 84 false Scaffold21692: 1-84 Capsella grandiflora
Cagra.21692s0001 10.0kb upstream 10.0kb upstream 2956 true Scaffold21692: 85-3040 Capsella grandiflora
Cagra.21692s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold21692: 3039-3040 Capsella grandiflora
Cagra.21692s0001 10.0kb downstream 10.0kb downstream 3038 true Scaffold21692: 1-3038 Capsella grandiflora
Cagra.21692s0001 10.0kb downstream 10.0kb downstream 84 false Scaffold21692: 1-84 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333098 5261 Brassicaceae Singleton cluster - no MSA
123838066 5264 Brassicales-Malvales View MSA
124346665 5266 SBM View MSA
124247109 5268 Malvidae View MSA
124069298 5270 Rosid View MSA
123746995 5271 Pentapetalae View MSA
122794843 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain