Gene : Cagra.21284s0001 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  1
Name:  ? Cagra.21284s0001 Secondary Identifier:  ? PAC:28901445
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21284s0001 0.5kb upstream 0.5kb upstream 1073 true Scaffold21284: 1535-2607 Capsella grandiflora
Cagra.21284s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold21284: 2606-2607 Capsella grandiflora
Cagra.21284s0001 0.5kb downstream 0.5kb downstream 1571 true Scaffold21284: 1035-2605 Capsella grandiflora
Cagra.21284s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold21284: 1035-1534 Capsella grandiflora
Cagra.21284s0001 1.0kb upstream 1.0kb upstream 1073 true Scaffold21284: 1535-2607 Capsella grandiflora
Cagra.21284s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold21284: 2606-2607 Capsella grandiflora
Cagra.21284s0001 1.0kb downstream 1.0kb downstream 2071 true Scaffold21284: 535-2605 Capsella grandiflora
Cagra.21284s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold21284: 535-1534 Capsella grandiflora
Cagra.21284s0001 2.0kb upstream 2.0kb upstream 1073 true Scaffold21284: 1535-2607 Capsella grandiflora
Cagra.21284s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold21284: 2606-2607 Capsella grandiflora
Cagra.21284s0001 2.0kb downstream 2.0kb downstream 2605 true Scaffold21284: 1-2605 Capsella grandiflora
Cagra.21284s0001 2.0kb downstream 2.0kb downstream 1534 false Scaffold21284: 1-1534 Capsella grandiflora
Cagra.21284s0001 5.0kb upstream 5.0kb upstream 1073 true Scaffold21284: 1535-2607 Capsella grandiflora
Cagra.21284s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold21284: 2606-2607 Capsella grandiflora
Cagra.21284s0001 5.0kb downstream 5.0kb downstream 2605 true Scaffold21284: 1-2605 Capsella grandiflora
Cagra.21284s0001 5.0kb downstream 5.0kb downstream 1534 false Scaffold21284: 1-1534 Capsella grandiflora
Cagra.21284s0001 10.0kb upstream 10.0kb upstream 1073 true Scaffold21284: 1535-2607 Capsella grandiflora
Cagra.21284s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold21284: 2606-2607 Capsella grandiflora
Cagra.21284s0001 10.0kb downstream 10.0kb downstream 2605 true Scaffold21284: 1-2605 Capsella grandiflora
Cagra.21284s0001 10.0kb downstream 10.0kb downstream 1534 false Scaffold21284: 1-1534 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333076 5261 Brassicaceae Singleton cluster - no MSA
123774066 5264 Brassicales-Malvales Singleton cluster - no MSA
124272524 5266 SBM Singleton cluster - no MSA
124249604 5268 Malvidae View MSA
124064214 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain