Gene : Cagra.21650s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10000:SF8 - HAD SUPERFAMILY HYDROLASE-LIKE, TYPE 3 Genomic Order:  3
Name:  ? Cagra.21650s0003 Secondary Identifier:  ? PAC:28904799
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUCOSE1PMETAB-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3881 Capsella grandiflora pathologic  
Cgrandiflora PWY66-399 Capsella grandiflora pathologic  
Cgrandiflora PWY-882 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21650s0003 0.5kb upstream 0.5kb upstream 3951 true Scaffold21650: 12387-16337 Capsella grandiflora
Cagra.21650s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold21650: 12387-12886 Capsella grandiflora
Cagra.21650s0003 0.5kb downstream 0.5kb downstream 3951 true Scaffold21650: 12887-16837 Capsella grandiflora
Cagra.21650s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold21650: 16338-16837 Capsella grandiflora
Cagra.21650s0003 1.0kb upstream 1.0kb upstream 4451 true Scaffold21650: 11887-16337 Capsella grandiflora
Cagra.21650s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold21650: 11887-12886 Capsella grandiflora
Cagra.21650s0003 1.0kb downstream 1.0kb downstream 4451 true Scaffold21650: 12887-17337 Capsella grandiflora
Cagra.21650s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold21650: 16338-17337 Capsella grandiflora
Cagra.21650s0003 2.0kb upstream 2.0kb upstream 5451 true Scaffold21650: 10887-16337 Capsella grandiflora
Cagra.21650s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold21650: 10887-12886 Capsella grandiflora
Cagra.21650s0003 2.0kb downstream 2.0kb downstream 5451 true Scaffold21650: 12887-18337 Capsella grandiflora
Cagra.21650s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold21650: 16338-18337 Capsella grandiflora
Cagra.21650s0003 5.0kb upstream 5.0kb upstream 8451 true Scaffold21650: 7887-16337 Capsella grandiflora
Cagra.21650s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold21650: 7887-12886 Capsella grandiflora
Cagra.21650s0003 5.0kb downstream 5.0kb downstream 5810 true Scaffold21650: 12887-18696 Capsella grandiflora
Cagra.21650s0003 5.0kb downstream 5.0kb downstream 2359 false Scaffold21650: 16338-18696 Capsella grandiflora
Cagra.21650s0003 10.0kb upstream 10.0kb upstream 13451 true Scaffold21650: 2887-16337 Capsella grandiflora
Cagra.21650s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold21650: 2887-12886 Capsella grandiflora
Cagra.21650s0003 10.0kb downstream 10.0kb downstream 5810 true Scaffold21650: 12887-18696 Capsella grandiflora
Cagra.21650s0003 10.0kb downstream 10.0kb downstream 2359 false Scaffold21650: 16338-18696 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372098 5261 Brassicaceae View MSA
123828074 5264 Brassicales-Malvales View MSA
124342192 5266 SBM View MSA
124242527 5268 Malvidae View MSA
124062911 5270 Rosid View MSA
123738949 5271 Pentapetalae View MSA
122790321 5272 Eudicot View MSA
122046350 5273 Angiosperm View MSA
121345493 5274 Embryophyte View MSA
123427682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain