Gene : Cagra.21986s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR14359:SF14 - AT HOOK MOTIF-CONTAINING PROTEIN Genomic Order:  4
Name:  ? Cagra.21986s0004 Secondary Identifier:  ? PAC:28894941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21986s0004 0.5kb upstream 0.5kb upstream 3019 true Scaffold21986: 10806-13824 Capsella grandiflora
Cagra.21986s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold21986: 13325-13824 Capsella grandiflora
Cagra.21986s0004 0.5kb downstream 0.5kb downstream 3019 true Scaffold21986: 10306-13324 Capsella grandiflora
Cagra.21986s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold21986: 10306-10805 Capsella grandiflora
Cagra.21986s0004 1.0kb upstream 1.0kb upstream 3519 true Scaffold21986: 10806-14324 Capsella grandiflora
Cagra.21986s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold21986: 13325-14324 Capsella grandiflora
Cagra.21986s0004 1.0kb downstream 1.0kb downstream 3519 true Scaffold21986: 9806-13324 Capsella grandiflora
Cagra.21986s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold21986: 9806-10805 Capsella grandiflora
Cagra.21986s0004 2.0kb upstream 2.0kb upstream 4519 true Scaffold21986: 10806-15324 Capsella grandiflora
Cagra.21986s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold21986: 13325-15324 Capsella grandiflora
Cagra.21986s0004 2.0kb downstream 2.0kb downstream 4519 true Scaffold21986: 8806-13324 Capsella grandiflora
Cagra.21986s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold21986: 8806-10805 Capsella grandiflora
Cagra.21986s0004 5.0kb upstream 5.0kb upstream 7519 true Scaffold21986: 10806-18324 Capsella grandiflora
Cagra.21986s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold21986: 13325-18324 Capsella grandiflora
Cagra.21986s0004 5.0kb downstream 5.0kb downstream 7519 true Scaffold21986: 5806-13324 Capsella grandiflora
Cagra.21986s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold21986: 5806-10805 Capsella grandiflora
Cagra.21986s0004 10.0kb upstream 10.0kb upstream 12519 true Scaffold21986: 10806-23324 Capsella grandiflora
Cagra.21986s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold21986: 13325-23324 Capsella grandiflora
Cagra.21986s0004 10.0kb downstream 10.0kb downstream 12519 true Scaffold21986: 806-13324 Capsella grandiflora
Cagra.21986s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold21986: 806-10805 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122374139 5261 Brassicaceae View MSA
123800688 5264 Brassicales-Malvales View MSA
124298068 5266 SBM View MSA
124149806 5268 Malvidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain