Gene : Cagra.21986s0003 C. grandiflora v1.1
Defline:  (1 of 2) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Genomic Order:  3
Name:  ? Cagra.21986s0003 Secondary Identifier:  ? PAC:28894934
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora COA-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.21986s0003 0.5kb upstream 0.5kb upstream 1932 true Scaffold21986: 9108-11039 Capsella grandiflora
Cagra.21986s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold21986: 10540-11039 Capsella grandiflora
Cagra.21986s0003 0.5kb downstream 0.5kb downstream 1932 true Scaffold21986: 8608-10539 Capsella grandiflora
Cagra.21986s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold21986: 8608-9107 Capsella grandiflora
Cagra.21986s0003 1.0kb upstream 1.0kb upstream 2432 true Scaffold21986: 9108-11539 Capsella grandiflora
Cagra.21986s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold21986: 10540-11539 Capsella grandiflora
Cagra.21986s0003 1.0kb downstream 1.0kb downstream 2432 true Scaffold21986: 8108-10539 Capsella grandiflora
Cagra.21986s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold21986: 8108-9107 Capsella grandiflora
Cagra.21986s0003 2.0kb upstream 2.0kb upstream 3432 true Scaffold21986: 9108-12539 Capsella grandiflora
Cagra.21986s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold21986: 10540-12539 Capsella grandiflora
Cagra.21986s0003 2.0kb downstream 2.0kb downstream 3432 true Scaffold21986: 7108-10539 Capsella grandiflora
Cagra.21986s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold21986: 7108-9107 Capsella grandiflora
Cagra.21986s0003 5.0kb upstream 5.0kb upstream 6432 true Scaffold21986: 9108-15539 Capsella grandiflora
Cagra.21986s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold21986: 10540-15539 Capsella grandiflora
Cagra.21986s0003 5.0kb downstream 5.0kb downstream 6432 true Scaffold21986: 4108-10539 Capsella grandiflora
Cagra.21986s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold21986: 4108-9107 Capsella grandiflora
Cagra.21986s0003 10.0kb upstream 10.0kb upstream 11432 true Scaffold21986: 9108-20539 Capsella grandiflora
Cagra.21986s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold21986: 10540-20539 Capsella grandiflora
Cagra.21986s0003 10.0kb downstream 10.0kb downstream 10539 true Scaffold21986: 1-10539 Capsella grandiflora
Cagra.21986s0003 10.0kb downstream 10.0kb downstream 9107 false Scaffold21986: 1-9107 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343260 5261 Brassicaceae View MSA
123783511 5264 Brassicales-Malvales View MSA
124281740 5266 SBM View MSA
124136448 5268 Malvidae View MSA
123864307 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain