Gene : Cagra.22666s0002 C. grandiflora v1.1
Defline:  (1 of 4) 4.1.1.25 - Tyrosine decarboxylase / L-tyrosine carboxy-lyase Genomic Order:  2
Name:  ? Cagra.22666s0002 Secondary Identifier:  ? PAC:28913201
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6802 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22666s0002 0.5kb upstream 0.5kb upstream 4537 true Scaffold22666: 2543-7079 Capsella grandiflora
Cagra.22666s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold22666: 2543-3042 Capsella grandiflora
Cagra.22666s0002 0.5kb downstream 0.5kb downstream 4175 true Scaffold22666: 3043-7217 Capsella grandiflora
Cagra.22666s0002 0.5kb downstream 0.5kb downstream 138 false Scaffold22666: 7080-7217 Capsella grandiflora
Cagra.22666s0002 1.0kb upstream 1.0kb upstream 5037 true Scaffold22666: 2043-7079 Capsella grandiflora
Cagra.22666s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold22666: 2043-3042 Capsella grandiflora
Cagra.22666s0002 1.0kb downstream 1.0kb downstream 4175 true Scaffold22666: 3043-7217 Capsella grandiflora
Cagra.22666s0002 1.0kb downstream 1.0kb downstream 138 false Scaffold22666: 7080-7217 Capsella grandiflora
Cagra.22666s0002 2.0kb upstream 2.0kb upstream 6037 true Scaffold22666: 1043-7079 Capsella grandiflora
Cagra.22666s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold22666: 1043-3042 Capsella grandiflora
Cagra.22666s0002 2.0kb downstream 2.0kb downstream 4175 true Scaffold22666: 3043-7217 Capsella grandiflora
Cagra.22666s0002 2.0kb downstream 2.0kb downstream 138 false Scaffold22666: 7080-7217 Capsella grandiflora
Cagra.22666s0002 5.0kb upstream 5.0kb upstream 7079 true Scaffold22666: 1-7079 Capsella grandiflora
Cagra.22666s0002 5.0kb upstream 5.0kb upstream 3042 false Scaffold22666: 1-3042 Capsella grandiflora
Cagra.22666s0002 5.0kb downstream 5.0kb downstream 4175 true Scaffold22666: 3043-7217 Capsella grandiflora
Cagra.22666s0002 5.0kb downstream 5.0kb downstream 138 false Scaffold22666: 7080-7217 Capsella grandiflora
Cagra.22666s0002 10.0kb upstream 10.0kb upstream 7079 true Scaffold22666: 1-7079 Capsella grandiflora
Cagra.22666s0002 10.0kb upstream 10.0kb upstream 3042 false Scaffold22666: 1-3042 Capsella grandiflora
Cagra.22666s0002 10.0kb downstream 10.0kb downstream 4175 true Scaffold22666: 3043-7217 Capsella grandiflora
Cagra.22666s0002 10.0kb downstream 10.0kb downstream 138 false Scaffold22666: 7080-7217 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333160 5261 Brassicaceae Singleton cluster - no MSA
123774140 5264 Brassicales-Malvales Singleton cluster - no MSA
124272593 5266 SBM Singleton cluster - no MSA
124252730 5268 Malvidae View MSA
124074916 5270 Rosid View MSA
123752986 5271 Pentapetalae View MSA
122774900 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain