Gene : Cagra.22721s0001 C. grandiflora v1.1
Defline:  (1 of 7) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) Genomic Order:  1
Name:  ? Cagra.22721s0001 Secondary Identifier:  ? PAC:28908144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22721s0001 0.5kb upstream 0.5kb upstream 1477 true Scaffold22721: 647-2123 Capsella grandiflora
Cagra.22721s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold22721: 647-1146 Capsella grandiflora
Cagra.22721s0001 0.5kb downstream 0.5kb downstream 978 true Scaffold22721: 1147-2124 Capsella grandiflora
Cagra.22721s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold22721: 2124-2124 Capsella grandiflora
Cagra.22721s0001 1.0kb upstream 1.0kb upstream 1977 true Scaffold22721: 147-2123 Capsella grandiflora
Cagra.22721s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold22721: 147-1146 Capsella grandiflora
Cagra.22721s0001 1.0kb downstream 1.0kb downstream 978 true Scaffold22721: 1147-2124 Capsella grandiflora
Cagra.22721s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold22721: 2124-2124 Capsella grandiflora
Cagra.22721s0001 2.0kb upstream 2.0kb upstream 2123 true Scaffold22721: 1-2123 Capsella grandiflora
Cagra.22721s0001 2.0kb upstream 2.0kb upstream 1146 false Scaffold22721: 1-1146 Capsella grandiflora
Cagra.22721s0001 2.0kb downstream 2.0kb downstream 978 true Scaffold22721: 1147-2124 Capsella grandiflora
Cagra.22721s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold22721: 2124-2124 Capsella grandiflora
Cagra.22721s0001 5.0kb upstream 5.0kb upstream 2123 true Scaffold22721: 1-2123 Capsella grandiflora
Cagra.22721s0001 5.0kb upstream 5.0kb upstream 1146 false Scaffold22721: 1-1146 Capsella grandiflora
Cagra.22721s0001 5.0kb downstream 5.0kb downstream 978 true Scaffold22721: 1147-2124 Capsella grandiflora
Cagra.22721s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold22721: 2124-2124 Capsella grandiflora
Cagra.22721s0001 10.0kb upstream 10.0kb upstream 2123 true Scaffold22721: 1-2123 Capsella grandiflora
Cagra.22721s0001 10.0kb upstream 10.0kb upstream 1146 false Scaffold22721: 1-1146 Capsella grandiflora
Cagra.22721s0001 10.0kb downstream 10.0kb downstream 978 true Scaffold22721: 1147-2124 Capsella grandiflora
Cagra.22721s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold22721: 2124-2124 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
122333164 5261 Brassicaceae Singleton cluster - no MSA
123841972 5264 Brassicales-Malvales View MSA
124349977 5266 SBM View MSA
124250054 5268 Malvidae View MSA
124062701 5270 Rosid View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain