Gene : Cagra.22797s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31209:SF0 - COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  1
Name:  ? Cagra.22797s0001 Secondary Identifier:  ? PAC:28900369
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-5723 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.22797s0001 0.5kb upstream 0.5kb upstream 2092 true Scaffold22797: 31-2122 Capsella grandiflora
Cagra.22797s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold22797: 1623-2122 Capsella grandiflora
Cagra.22797s0001 0.5kb downstream 0.5kb downstream 1622 true Scaffold22797: 1-1622 Capsella grandiflora
Cagra.22797s0001 0.5kb downstream 0.5kb downstream 30 false Scaffold22797: 1-30 Capsella grandiflora
Cagra.22797s0001 1.0kb upstream 1.0kb upstream 2592 true Scaffold22797: 31-2622 Capsella grandiflora
Cagra.22797s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold22797: 1623-2622 Capsella grandiflora
Cagra.22797s0001 1.0kb downstream 1.0kb downstream 1622 true Scaffold22797: 1-1622 Capsella grandiflora
Cagra.22797s0001 1.0kb downstream 1.0kb downstream 30 false Scaffold22797: 1-30 Capsella grandiflora
Cagra.22797s0001 2.0kb upstream 2.0kb upstream 3592 true Scaffold22797: 31-3622 Capsella grandiflora
Cagra.22797s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold22797: 1623-3622 Capsella grandiflora
Cagra.22797s0001 2.0kb downstream 2.0kb downstream 1622 true Scaffold22797: 1-1622 Capsella grandiflora
Cagra.22797s0001 2.0kb downstream 2.0kb downstream 30 false Scaffold22797: 1-30 Capsella grandiflora
Cagra.22797s0001 5.0kb upstream 5.0kb upstream 6592 true Scaffold22797: 31-6622 Capsella grandiflora
Cagra.22797s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold22797: 1623-6622 Capsella grandiflora
Cagra.22797s0001 5.0kb downstream 5.0kb downstream 1622 true Scaffold22797: 1-1622 Capsella grandiflora
Cagra.22797s0001 5.0kb downstream 5.0kb downstream 30 false Scaffold22797: 1-30 Capsella grandiflora
Cagra.22797s0001 10.0kb upstream 10.0kb upstream 7148 true Scaffold22797: 31-7178 Capsella grandiflora
Cagra.22797s0001 10.0kb upstream 10.0kb upstream 5556 false Scaffold22797: 1623-7178 Capsella grandiflora
Cagra.22797s0001 10.0kb downstream 10.0kb downstream 1622 true Scaffold22797: 1-1622 Capsella grandiflora
Cagra.22797s0001 10.0kb downstream 10.0kb downstream 30 false Scaffold22797: 1-30 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333166 5261 Brassicaceae Singleton cluster - no MSA
123774145 5264 Brassicales-Malvales Singleton cluster - no MSA
124272598 5266 SBM Singleton cluster - no MSA
124128391 5268 Malvidae Singleton cluster - no MSA
124068115 5270 Rosid View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain