Gene : Cagra.19594s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21338 - MITOCHONDRIAL RIBOSOMAL PROTEIN L41 Genomic Order:  1
Name:  ? Cagra.19594s0001 Secondary Identifier:  ? PAC:28908012
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.19594s0001 0.5kb upstream 0.5kb upstream 2132 true Scaffold19594: 5265-7396 Capsella grandiflora
Cagra.19594s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19594: 6897-7396 Capsella grandiflora
Cagra.19594s0001 0.5kb downstream 0.5kb downstream 2132 true Scaffold19594: 4765-6896 Capsella grandiflora
Cagra.19594s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold19594: 4765-5264 Capsella grandiflora
Cagra.19594s0001 1.0kb upstream 1.0kb upstream 2632 true Scaffold19594: 5265-7896 Capsella grandiflora
Cagra.19594s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold19594: 6897-7896 Capsella grandiflora
Cagra.19594s0001 1.0kb downstream 1.0kb downstream 2632 true Scaffold19594: 4265-6896 Capsella grandiflora
Cagra.19594s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold19594: 4265-5264 Capsella grandiflora
Cagra.19594s0001 2.0kb upstream 2.0kb upstream 3632 true Scaffold19594: 5265-8896 Capsella grandiflora
Cagra.19594s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold19594: 6897-8896 Capsella grandiflora
Cagra.19594s0001 2.0kb downstream 2.0kb downstream 3632 true Scaffold19594: 3265-6896 Capsella grandiflora
Cagra.19594s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold19594: 3265-5264 Capsella grandiflora
Cagra.19594s0001 5.0kb upstream 5.0kb upstream 6632 true Scaffold19594: 5265-11896 Capsella grandiflora
Cagra.19594s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold19594: 6897-11896 Capsella grandiflora
Cagra.19594s0001 5.0kb downstream 5.0kb downstream 6632 true Scaffold19594: 265-6896 Capsella grandiflora
Cagra.19594s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold19594: 265-5264 Capsella grandiflora
Cagra.19594s0001 10.0kb upstream 10.0kb upstream 11251 true Scaffold19594: 5265-16515 Capsella grandiflora
Cagra.19594s0001 10.0kb upstream 10.0kb upstream 9619 false Scaffold19594: 6897-16515 Capsella grandiflora
Cagra.19594s0001 10.0kb downstream 10.0kb downstream 6896 true Scaffold19594: 1-6896 Capsella grandiflora
Cagra.19594s0001 10.0kb downstream 10.0kb downstream 5264 false Scaffold19594: 1-5264 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028385 5273 Angiosperm View MSA
122379339 5261 Brassicaceae View MSA
123833906 5264 Brassicales-Malvales View MSA
124339719 5266 SBM View MSA
124251148 5268 Malvidae View MSA
124063798 5270 Rosid View MSA
123753654 5271 Pentapetalae View MSA
122788014 5272 Eudicot View MSA
121347699 5274 Embryophyte View MSA
123426037 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain