Gene : Cagra.20176s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  1
Name:  ? Cagra.20176s0001 Secondary Identifier:  ? PAC:28898677
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20176s0001 0.5kb upstream 0.5kb upstream 2569 true Scaffold20176: 2045-4613 Capsella grandiflora
Cagra.20176s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold20176: 2045-2544 Capsella grandiflora
Cagra.20176s0001 0.5kb downstream 0.5kb downstream 2569 true Scaffold20176: 2545-5113 Capsella grandiflora
Cagra.20176s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold20176: 4614-5113 Capsella grandiflora
Cagra.20176s0001 1.0kb upstream 1.0kb upstream 3069 true Scaffold20176: 1545-4613 Capsella grandiflora
Cagra.20176s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold20176: 1545-2544 Capsella grandiflora
Cagra.20176s0001 1.0kb downstream 1.0kb downstream 3069 true Scaffold20176: 2545-5613 Capsella grandiflora
Cagra.20176s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold20176: 4614-5613 Capsella grandiflora
Cagra.20176s0001 2.0kb upstream 2.0kb upstream 4069 true Scaffold20176: 545-4613 Capsella grandiflora
Cagra.20176s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold20176: 545-2544 Capsella grandiflora
Cagra.20176s0001 2.0kb downstream 2.0kb downstream 4069 true Scaffold20176: 2545-6613 Capsella grandiflora
Cagra.20176s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold20176: 4614-6613 Capsella grandiflora
Cagra.20176s0001 5.0kb upstream 5.0kb upstream 4613 true Scaffold20176: 1-4613 Capsella grandiflora
Cagra.20176s0001 5.0kb upstream 5.0kb upstream 2544 false Scaffold20176: 1-2544 Capsella grandiflora
Cagra.20176s0001 5.0kb downstream 5.0kb downstream 4868 true Scaffold20176: 2545-7412 Capsella grandiflora
Cagra.20176s0001 5.0kb downstream 5.0kb downstream 2799 false Scaffold20176: 4614-7412 Capsella grandiflora
Cagra.20176s0001 10.0kb upstream 10.0kb upstream 4613 true Scaffold20176: 1-4613 Capsella grandiflora
Cagra.20176s0001 10.0kb upstream 10.0kb upstream 2544 false Scaffold20176: 1-2544 Capsella grandiflora
Cagra.20176s0001 10.0kb downstream 10.0kb downstream 4868 true Scaffold20176: 2545-7412 Capsella grandiflora
Cagra.20176s0001 10.0kb downstream 10.0kb downstream 2799 false Scaffold20176: 4614-7412 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779248 5273 Angiosperm View MSA
122376371 5261 Brassicaceae View MSA
123801227 5264 Brassicales-Malvales View MSA
124298552 5266 SBM View MSA
124150170 5268 Malvidae View MSA
123875834 5270 Rosid View MSA
123741520 5271 Pentapetalae View MSA
122770070 5272 Eudicot View MSA
121050922 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain