Gene : Cagra.20132s0011 C. grandiflora v1.1
Defline:  (1 of 1) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  11
Name:  ? Cagra.20132s0011 Secondary Identifier:  ? PAC:28906662
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3841 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20132s0011 0.5kb upstream 0.5kb upstream 2862 true Scaffold20132: 23384-26245 Capsella grandiflora
Cagra.20132s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold20132: 25746-26245 Capsella grandiflora
Cagra.20132s0011 0.5kb downstream 0.5kb downstream 2862 true Scaffold20132: 22884-25745 Capsella grandiflora
Cagra.20132s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold20132: 22884-23383 Capsella grandiflora
Cagra.20132s0011 1.0kb upstream 1.0kb upstream 3362 true Scaffold20132: 23384-26745 Capsella grandiflora
Cagra.20132s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold20132: 25746-26745 Capsella grandiflora
Cagra.20132s0011 1.0kb downstream 1.0kb downstream 3362 true Scaffold20132: 22384-25745 Capsella grandiflora
Cagra.20132s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold20132: 22384-23383 Capsella grandiflora
Cagra.20132s0011 2.0kb upstream 2.0kb upstream 4362 true Scaffold20132: 23384-27745 Capsella grandiflora
Cagra.20132s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold20132: 25746-27745 Capsella grandiflora
Cagra.20132s0011 2.0kb downstream 2.0kb downstream 4362 true Scaffold20132: 21384-25745 Capsella grandiflora
Cagra.20132s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold20132: 21384-23383 Capsella grandiflora
Cagra.20132s0011 5.0kb upstream 5.0kb upstream 7362 true Scaffold20132: 23384-30745 Capsella grandiflora
Cagra.20132s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold20132: 25746-30745 Capsella grandiflora
Cagra.20132s0011 5.0kb downstream 5.0kb downstream 7362 true Scaffold20132: 18384-25745 Capsella grandiflora
Cagra.20132s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold20132: 18384-23383 Capsella grandiflora
Cagra.20132s0011 10.0kb upstream 10.0kb upstream 9958 true Scaffold20132: 23384-33341 Capsella grandiflora
Cagra.20132s0011 10.0kb upstream 10.0kb upstream 7596 false Scaffold20132: 25746-33341 Capsella grandiflora
Cagra.20132s0011 10.0kb downstream 10.0kb downstream 12362 true Scaffold20132: 13384-25745 Capsella grandiflora
Cagra.20132s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold20132: 13384-23383 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337619 5261 Brassicaceae View MSA
123838386 5264 Brassicales-Malvales View MSA
124347024 5266 SBM View MSA
124247002 5268 Malvidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain