Gene : Cagra.20534s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24096:SF190 - EBONY Genomic Order:  1
Name:  ? Cagra.20534s0001 Secondary Identifier:  ? PAC:28895410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20534s0001 0.5kb upstream 0.5kb upstream 7589 true Scaffold20534: 1-7589 Capsella grandiflora
Cagra.20534s0001 0.5kb upstream 0.5kb upstream 18 false Scaffold20534: 1-18 Capsella grandiflora
Cagra.20534s0001 0.5kb downstream 0.5kb downstream 7967 true Scaffold20534: 19-7985 Capsella grandiflora
Cagra.20534s0001 0.5kb downstream 0.5kb downstream 396 false Scaffold20534: 7590-7985 Capsella grandiflora
Cagra.20534s0001 1.0kb upstream 1.0kb upstream 7589 true Scaffold20534: 1-7589 Capsella grandiflora
Cagra.20534s0001 1.0kb upstream 1.0kb upstream 18 false Scaffold20534: 1-18 Capsella grandiflora
Cagra.20534s0001 1.0kb downstream 1.0kb downstream 7967 true Scaffold20534: 19-7985 Capsella grandiflora
Cagra.20534s0001 1.0kb downstream 1.0kb downstream 396 false Scaffold20534: 7590-7985 Capsella grandiflora
Cagra.20534s0001 2.0kb upstream 2.0kb upstream 7589 true Scaffold20534: 1-7589 Capsella grandiflora
Cagra.20534s0001 2.0kb upstream 2.0kb upstream 18 false Scaffold20534: 1-18 Capsella grandiflora
Cagra.20534s0001 2.0kb downstream 2.0kb downstream 7967 true Scaffold20534: 19-7985 Capsella grandiflora
Cagra.20534s0001 2.0kb downstream 2.0kb downstream 396 false Scaffold20534: 7590-7985 Capsella grandiflora
Cagra.20534s0001 5.0kb upstream 5.0kb upstream 7589 true Scaffold20534: 1-7589 Capsella grandiflora
Cagra.20534s0001 5.0kb upstream 5.0kb upstream 18 false Scaffold20534: 1-18 Capsella grandiflora
Cagra.20534s0001 5.0kb downstream 5.0kb downstream 7967 true Scaffold20534: 19-7985 Capsella grandiflora
Cagra.20534s0001 5.0kb downstream 5.0kb downstream 396 false Scaffold20534: 7590-7985 Capsella grandiflora
Cagra.20534s0001 10.0kb upstream 10.0kb upstream 7589 true Scaffold20534: 1-7589 Capsella grandiflora
Cagra.20534s0001 10.0kb upstream 10.0kb upstream 18 false Scaffold20534: 1-18 Capsella grandiflora
Cagra.20534s0001 10.0kb downstream 10.0kb downstream 7967 true Scaffold20534: 19-7985 Capsella grandiflora
Cagra.20534s0001 10.0kb downstream 10.0kb downstream 396 false Scaffold20534: 7590-7985 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374583 5261 Brassicaceae View MSA
123832764 5264 Brassicales-Malvales View MSA
124344977 5266 SBM View MSA
124237275 5268 Malvidae View MSA
124050349 5270 Rosid View MSA
123736746 5271 Pentapetalae View MSA
122793202 5272 Eudicot View MSA
122047218 5273 Angiosperm View MSA
121345046 5274 Embryophyte View MSA
123425856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain