Gene : Cagra.20595s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21091:SF18 - RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE I Genomic Order:  1
Name:  ? Cagra.20595s0001 Secondary Identifier:  ? PAC:28906958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20595s0001 0.5kb upstream 0.5kb upstream 2089 true Scaffold20595: 2-2090 Capsella grandiflora
Cagra.20595s0001 0.5kb upstream 0.5kb upstream 2 false Scaffold20595: 2089-2090 Capsella grandiflora
Cagra.20595s0001 0.5kb downstream 0.5kb downstream 2088 true Scaffold20595: 1-2088 Capsella grandiflora
Cagra.20595s0001 0.5kb downstream 0.5kb downstream 1 false Scaffold20595: 1-1 Capsella grandiflora
Cagra.20595s0001 1.0kb upstream 1.0kb upstream 2089 true Scaffold20595: 2-2090 Capsella grandiflora
Cagra.20595s0001 1.0kb upstream 1.0kb upstream 2 false Scaffold20595: 2089-2090 Capsella grandiflora
Cagra.20595s0001 1.0kb downstream 1.0kb downstream 2088 true Scaffold20595: 1-2088 Capsella grandiflora
Cagra.20595s0001 1.0kb downstream 1.0kb downstream 1 false Scaffold20595: 1-1 Capsella grandiflora
Cagra.20595s0001 2.0kb upstream 2.0kb upstream 2089 true Scaffold20595: 2-2090 Capsella grandiflora
Cagra.20595s0001 2.0kb upstream 2.0kb upstream 2 false Scaffold20595: 2089-2090 Capsella grandiflora
Cagra.20595s0001 2.0kb downstream 2.0kb downstream 2088 true Scaffold20595: 1-2088 Capsella grandiflora
Cagra.20595s0001 2.0kb downstream 2.0kb downstream 1 false Scaffold20595: 1-1 Capsella grandiflora
Cagra.20595s0001 5.0kb upstream 5.0kb upstream 2089 true Scaffold20595: 2-2090 Capsella grandiflora
Cagra.20595s0001 5.0kb upstream 5.0kb upstream 2 false Scaffold20595: 2089-2090 Capsella grandiflora
Cagra.20595s0001 5.0kb downstream 5.0kb downstream 2088 true Scaffold20595: 1-2088 Capsella grandiflora
Cagra.20595s0001 5.0kb downstream 5.0kb downstream 1 false Scaffold20595: 1-1 Capsella grandiflora
Cagra.20595s0001 10.0kb upstream 10.0kb upstream 2089 true Scaffold20595: 2-2090 Capsella grandiflora
Cagra.20595s0001 10.0kb upstream 10.0kb upstream 2 false Scaffold20595: 2089-2090 Capsella grandiflora
Cagra.20595s0001 10.0kb downstream 10.0kb downstream 2088 true Scaffold20595: 1-2088 Capsella grandiflora
Cagra.20595s0001 10.0kb downstream 10.0kb downstream 1 false Scaffold20595: 1-1 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373833 5261 Brassicaceae View MSA
123827961 5264 Brassicales-Malvales View MSA
124344254 5266 SBM View MSA
124238808 5268 Malvidae View MSA
124062180 5270 Rosid View MSA
123741052 5271 Pentapetalae View MSA
122786797 5272 Eudicot View MSA
122043278 5273 Angiosperm View MSA
121347213 5274 Embryophyte View MSA
123424563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain