Gene : Cagra.20650s0003 C. grandiflora v1.1
Defline:  (1 of 64) PTHR32410:SF152 - C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.20650s0003 Secondary Identifier:  ? PAC:28913245
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20650s0003 0.5kb upstream 0.5kb upstream 2937 true Scaffold20650: 12173-15109 Capsella grandiflora
Cagra.20650s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold20650: 12173-12672 Capsella grandiflora
Cagra.20650s0003 0.5kb downstream 0.5kb downstream 2937 true Scaffold20650: 12673-15609 Capsella grandiflora
Cagra.20650s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold20650: 15110-15609 Capsella grandiflora
Cagra.20650s0003 1.0kb upstream 1.0kb upstream 3437 true Scaffold20650: 11673-15109 Capsella grandiflora
Cagra.20650s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold20650: 11673-12672 Capsella grandiflora
Cagra.20650s0003 1.0kb downstream 1.0kb downstream 3437 true Scaffold20650: 12673-16109 Capsella grandiflora
Cagra.20650s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold20650: 15110-16109 Capsella grandiflora
Cagra.20650s0003 2.0kb upstream 2.0kb upstream 4437 true Scaffold20650: 10673-15109 Capsella grandiflora
Cagra.20650s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold20650: 10673-12672 Capsella grandiflora
Cagra.20650s0003 2.0kb downstream 2.0kb downstream 3702 true Scaffold20650: 12673-16374 Capsella grandiflora
Cagra.20650s0003 2.0kb downstream 2.0kb downstream 1265 false Scaffold20650: 15110-16374 Capsella grandiflora
Cagra.20650s0003 5.0kb upstream 5.0kb upstream 7437 true Scaffold20650: 7673-15109 Capsella grandiflora
Cagra.20650s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold20650: 7673-12672 Capsella grandiflora
Cagra.20650s0003 5.0kb downstream 5.0kb downstream 3702 true Scaffold20650: 12673-16374 Capsella grandiflora
Cagra.20650s0003 5.0kb downstream 5.0kb downstream 1265 false Scaffold20650: 15110-16374 Capsella grandiflora
Cagra.20650s0003 10.0kb upstream 10.0kb upstream 12437 true Scaffold20650: 2673-15109 Capsella grandiflora
Cagra.20650s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold20650: 2673-12672 Capsella grandiflora
Cagra.20650s0003 10.0kb downstream 10.0kb downstream 3702 true Scaffold20650: 12673-16374 Capsella grandiflora
Cagra.20650s0003 10.0kb downstream 10.0kb downstream 1265 false Scaffold20650: 15110-16374 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333043 5261 Brassicaceae Singleton cluster - no MSA
123774040 5264 Brassicales-Malvales Singleton cluster - no MSA
124272498 5266 SBM Singleton cluster - no MSA
124128310 5268 Malvidae Singleton cluster - no MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain