Gene : Cagra.20869s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12595:SF6 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 9 Genomic Order:  4
Name:  ? Cagra.20869s0004 Secondary Identifier:  ? PAC:28893514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20869s0004 0.5kb upstream 0.5kb upstream 1895 true Scaffold20869: 11890-13784 Capsella grandiflora
Cagra.20869s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold20869: 11890-12389 Capsella grandiflora
Cagra.20869s0004 0.5kb downstream 0.5kb downstream 1895 true Scaffold20869: 12390-14284 Capsella grandiflora
Cagra.20869s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold20869: 13785-14284 Capsella grandiflora
Cagra.20869s0004 1.0kb upstream 1.0kb upstream 2395 true Scaffold20869: 11390-13784 Capsella grandiflora
Cagra.20869s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold20869: 11390-12389 Capsella grandiflora
Cagra.20869s0004 1.0kb downstream 1.0kb downstream 2395 true Scaffold20869: 12390-14784 Capsella grandiflora
Cagra.20869s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold20869: 13785-14784 Capsella grandiflora
Cagra.20869s0004 2.0kb upstream 2.0kb upstream 3395 true Scaffold20869: 10390-13784 Capsella grandiflora
Cagra.20869s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold20869: 10390-12389 Capsella grandiflora
Cagra.20869s0004 2.0kb downstream 2.0kb downstream 3395 true Scaffold20869: 12390-15784 Capsella grandiflora
Cagra.20869s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold20869: 13785-15784 Capsella grandiflora
Cagra.20869s0004 5.0kb upstream 5.0kb upstream 6395 true Scaffold20869: 7390-13784 Capsella grandiflora
Cagra.20869s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold20869: 7390-12389 Capsella grandiflora
Cagra.20869s0004 5.0kb downstream 5.0kb downstream 6395 true Scaffold20869: 12390-18784 Capsella grandiflora
Cagra.20869s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold20869: 13785-18784 Capsella grandiflora
Cagra.20869s0004 10.0kb upstream 10.0kb upstream 11395 true Scaffold20869: 2390-13784 Capsella grandiflora
Cagra.20869s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold20869: 2390-12389 Capsella grandiflora
Cagra.20869s0004 10.0kb downstream 10.0kb downstream 11395 true Scaffold20869: 12390-23784 Capsella grandiflora
Cagra.20869s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold20869: 13785-23784 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374371 5261 Brassicaceae View MSA
123832358 5264 Brassicales-Malvales View MSA
124349417 5266 SBM View MSA
124242988 5268 Malvidae View MSA
124067490 5270 Rosid View MSA
123736681 5271 Pentapetalae View MSA
122786173 5272 Eudicot View MSA
122043931 5273 Angiosperm View MSA
121344953 5274 Embryophyte View MSA
123428826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain