Gene : Cagra.20893s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23084:SF156 - RADIAL SPOKE HEAD 10 HOMOLOG B2 Genomic Order:  3
Name:  ? Cagra.20893s0003 Secondary Identifier:  ? PAC:28909198
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6352 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20893s0003 0.5kb upstream 0.5kb upstream 2568 true Scaffold20893: 5933-8500 Capsella grandiflora
Cagra.20893s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold20893: 8001-8500 Capsella grandiflora
Cagra.20893s0003 0.5kb downstream 0.5kb downstream 2568 true Scaffold20893: 5433-8000 Capsella grandiflora
Cagra.20893s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold20893: 5433-5932 Capsella grandiflora
Cagra.20893s0003 1.0kb upstream 1.0kb upstream 3068 true Scaffold20893: 5933-9000 Capsella grandiflora
Cagra.20893s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold20893: 8001-9000 Capsella grandiflora
Cagra.20893s0003 1.0kb downstream 1.0kb downstream 3068 true Scaffold20893: 4933-8000 Capsella grandiflora
Cagra.20893s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold20893: 4933-5932 Capsella grandiflora
Cagra.20893s0003 2.0kb upstream 2.0kb upstream 4068 true Scaffold20893: 5933-10000 Capsella grandiflora
Cagra.20893s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold20893: 8001-10000 Capsella grandiflora
Cagra.20893s0003 2.0kb downstream 2.0kb downstream 4068 true Scaffold20893: 3933-8000 Capsella grandiflora
Cagra.20893s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold20893: 3933-5932 Capsella grandiflora
Cagra.20893s0003 5.0kb upstream 5.0kb upstream 7068 true Scaffold20893: 5933-13000 Capsella grandiflora
Cagra.20893s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold20893: 8001-13000 Capsella grandiflora
Cagra.20893s0003 5.0kb downstream 5.0kb downstream 7068 true Scaffold20893: 933-8000 Capsella grandiflora
Cagra.20893s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold20893: 933-5932 Capsella grandiflora
Cagra.20893s0003 10.0kb upstream 10.0kb upstream 12068 true Scaffold20893: 5933-18000 Capsella grandiflora
Cagra.20893s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold20893: 8001-18000 Capsella grandiflora
Cagra.20893s0003 10.0kb downstream 10.0kb downstream 8000 true Scaffold20893: 1-8000 Capsella grandiflora
Cagra.20893s0003 10.0kb downstream 10.0kb downstream 5932 false Scaffold20893: 1-5932 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377573 5261 Brassicaceae View MSA
123839636 5264 Brassicales-Malvales View MSA
124340371 5266 SBM View MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain