Gene : Cagra.20893s0002 C. grandiflora v1.1
Defline:  (1 of 8) PF03469 - XH domain (XH) Genomic Order:  2
Name:  ? Cagra.20893s0002 Secondary Identifier:  ? PAC:28909202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20893s0002 0.5kb upstream 0.5kb upstream 1233 true Scaffold20893: 4803-6035 Capsella grandiflora
Cagra.20893s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold20893: 5536-6035 Capsella grandiflora
Cagra.20893s0002 0.5kb downstream 0.5kb downstream 1233 true Scaffold20893: 4303-5535 Capsella grandiflora
Cagra.20893s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold20893: 4303-4802 Capsella grandiflora
Cagra.20893s0002 1.0kb upstream 1.0kb upstream 1733 true Scaffold20893: 4803-6535 Capsella grandiflora
Cagra.20893s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold20893: 5536-6535 Capsella grandiflora
Cagra.20893s0002 1.0kb downstream 1.0kb downstream 1733 true Scaffold20893: 3803-5535 Capsella grandiflora
Cagra.20893s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold20893: 3803-4802 Capsella grandiflora
Cagra.20893s0002 2.0kb upstream 2.0kb upstream 2733 true Scaffold20893: 4803-7535 Capsella grandiflora
Cagra.20893s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold20893: 5536-7535 Capsella grandiflora
Cagra.20893s0002 2.0kb downstream 2.0kb downstream 2733 true Scaffold20893: 2803-5535 Capsella grandiflora
Cagra.20893s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold20893: 2803-4802 Capsella grandiflora
Cagra.20893s0002 5.0kb upstream 5.0kb upstream 5733 true Scaffold20893: 4803-10535 Capsella grandiflora
Cagra.20893s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold20893: 5536-10535 Capsella grandiflora
Cagra.20893s0002 5.0kb downstream 5.0kb downstream 5535 true Scaffold20893: 1-5535 Capsella grandiflora
Cagra.20893s0002 5.0kb downstream 5.0kb downstream 4802 false Scaffold20893: 1-4802 Capsella grandiflora
Cagra.20893s0002 10.0kb upstream 10.0kb upstream 10733 true Scaffold20893: 4803-15535 Capsella grandiflora
Cagra.20893s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold20893: 5536-15535 Capsella grandiflora
Cagra.20893s0002 10.0kb downstream 10.0kb downstream 5535 true Scaffold20893: 1-5535 Capsella grandiflora
Cagra.20893s0002 10.0kb downstream 10.0kb downstream 4802 false Scaffold20893: 1-4802 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361267 5261 Brassicaceae View MSA
123798126 5264 Brassicales-Malvales View MSA
124295802 5266 SBM View MSA
124148141 5268 Malvidae View MSA
123874197 5270 Rosid View MSA
123458205 5271 Pentapetalae View MSA
122493615 5272 Eudicot View MSA
122049313 5273 Angiosperm View MSA
121351594 5274 Embryophyte View MSA
123382240 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain