Gene : Cagra.20893s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  9
Name:  ? Cagra.20893s0009 Secondary Identifier:  ? PAC:28909200
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.20893s0009 0.5kb upstream 0.5kb upstream 2076 true Scaffold20893: 20603-22678 Capsella grandiflora
Cagra.20893s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold20893: 20603-21102 Capsella grandiflora
Cagra.20893s0009 0.5kb downstream 0.5kb downstream 2076 true Scaffold20893: 21103-23178 Capsella grandiflora
Cagra.20893s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold20893: 22679-23178 Capsella grandiflora
Cagra.20893s0009 1.0kb upstream 1.0kb upstream 2576 true Scaffold20893: 20103-22678 Capsella grandiflora
Cagra.20893s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold20893: 20103-21102 Capsella grandiflora
Cagra.20893s0009 1.0kb downstream 1.0kb downstream 2576 true Scaffold20893: 21103-23678 Capsella grandiflora
Cagra.20893s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold20893: 22679-23678 Capsella grandiflora
Cagra.20893s0009 2.0kb upstream 2.0kb upstream 3576 true Scaffold20893: 19103-22678 Capsella grandiflora
Cagra.20893s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold20893: 19103-21102 Capsella grandiflora
Cagra.20893s0009 2.0kb downstream 2.0kb downstream 3576 true Scaffold20893: 21103-24678 Capsella grandiflora
Cagra.20893s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold20893: 22679-24678 Capsella grandiflora
Cagra.20893s0009 5.0kb upstream 5.0kb upstream 6576 true Scaffold20893: 16103-22678 Capsella grandiflora
Cagra.20893s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold20893: 16103-21102 Capsella grandiflora
Cagra.20893s0009 5.0kb downstream 5.0kb downstream 6576 true Scaffold20893: 21103-27678 Capsella grandiflora
Cagra.20893s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold20893: 22679-27678 Capsella grandiflora
Cagra.20893s0009 10.0kb upstream 10.0kb upstream 11576 true Scaffold20893: 11103-22678 Capsella grandiflora
Cagra.20893s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold20893: 11103-21102 Capsella grandiflora
Cagra.20893s0009 10.0kb downstream 10.0kb downstream 11576 true Scaffold20893: 21103-32678 Capsella grandiflora
Cagra.20893s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold20893: 22679-32678 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376828 5261 Brassicaceae View MSA
123828982 5264 Brassicales-Malvales View MSA
124336806 5266 SBM View MSA
124239117 5268 Malvidae View MSA
124068304 5270 Rosid View MSA
123739380 5271 Pentapetalae View MSA
122792095 5272 Eudicot View MSA
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain