Gene : Cagra.17944s0005 C. grandiflora v1.1
Defline:  (1 of 2) 1.3.1.78 - Arogenate dehydrogenase (NADP(+)) / TyrAAT2 Genomic Order:  5
Name:  ? Cagra.17944s0005 Secondary Identifier:  ? PAC:28916602
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3461 Capsella grandiflora pathologic  
Cgrandiflora PWY-3481 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17944s0005 0.5kb upstream 0.5kb upstream 3012 true Scaffold17944: 22162-25173 Capsella grandiflora
Cagra.17944s0005 0.5kb upstream 0.5kb upstream 29 false Scaffold17944: 25145-25173 Capsella grandiflora
Cagra.17944s0005 0.5kb downstream 0.5kb downstream 3483 true Scaffold17944: 21662-25144 Capsella grandiflora
Cagra.17944s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold17944: 21662-22161 Capsella grandiflora
Cagra.17944s0005 1.0kb upstream 1.0kb upstream 3012 true Scaffold17944: 22162-25173 Capsella grandiflora
Cagra.17944s0005 1.0kb upstream 1.0kb upstream 29 false Scaffold17944: 25145-25173 Capsella grandiflora
Cagra.17944s0005 1.0kb downstream 1.0kb downstream 3983 true Scaffold17944: 21162-25144 Capsella grandiflora
Cagra.17944s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold17944: 21162-22161 Capsella grandiflora
Cagra.17944s0005 2.0kb upstream 2.0kb upstream 3012 true Scaffold17944: 22162-25173 Capsella grandiflora
Cagra.17944s0005 2.0kb upstream 2.0kb upstream 29 false Scaffold17944: 25145-25173 Capsella grandiflora
Cagra.17944s0005 2.0kb downstream 2.0kb downstream 4983 true Scaffold17944: 20162-25144 Capsella grandiflora
Cagra.17944s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold17944: 20162-22161 Capsella grandiflora
Cagra.17944s0005 5.0kb upstream 5.0kb upstream 3012 true Scaffold17944: 22162-25173 Capsella grandiflora
Cagra.17944s0005 5.0kb upstream 5.0kb upstream 29 false Scaffold17944: 25145-25173 Capsella grandiflora
Cagra.17944s0005 5.0kb downstream 5.0kb downstream 7983 true Scaffold17944: 17162-25144 Capsella grandiflora
Cagra.17944s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold17944: 17162-22161 Capsella grandiflora
Cagra.17944s0005 10.0kb upstream 10.0kb upstream 3012 true Scaffold17944: 22162-25173 Capsella grandiflora
Cagra.17944s0005 10.0kb upstream 10.0kb upstream 29 false Scaffold17944: 25145-25173 Capsella grandiflora
Cagra.17944s0005 10.0kb downstream 10.0kb downstream 12983 true Scaffold17944: 12162-25144 Capsella grandiflora
Cagra.17944s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold17944: 12162-22161 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691084 5273 Angiosperm View MSA
122371783 5261 Brassicaceae View MSA
123834030 5264 Brassicales-Malvales View MSA
124341589 5266 SBM View MSA
124242985 5268 Malvidae View MSA
124038185 5270 Rosid View MSA
123646805 5271 Pentapetalae View MSA
122680847 5272 Eudicot View MSA
121351682 5274 Embryophyte View MSA
123427304 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain