Gene : Cagra.18121s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11937:SF236 - ACTIN-1-RELATED Genomic Order:  3
Name:  ? Cagra.18121s0003 Secondary Identifier:  ? PAC:28914949
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18121s0003 0.5kb upstream 0.5kb upstream 2817 true Scaffold18121: 8462-11278 Capsella grandiflora
Cagra.18121s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold18121: 8462-8961 Capsella grandiflora
Cagra.18121s0003 0.5kb downstream 0.5kb downstream 2817 true Scaffold18121: 8962-11778 Capsella grandiflora
Cagra.18121s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold18121: 11279-11778 Capsella grandiflora
Cagra.18121s0003 1.0kb upstream 1.0kb upstream 3317 true Scaffold18121: 7962-11278 Capsella grandiflora
Cagra.18121s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold18121: 7962-8961 Capsella grandiflora
Cagra.18121s0003 1.0kb downstream 1.0kb downstream 3317 true Scaffold18121: 8962-12278 Capsella grandiflora
Cagra.18121s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold18121: 11279-12278 Capsella grandiflora
Cagra.18121s0003 2.0kb upstream 2.0kb upstream 4317 true Scaffold18121: 6962-11278 Capsella grandiflora
Cagra.18121s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold18121: 6962-8961 Capsella grandiflora
Cagra.18121s0003 2.0kb downstream 2.0kb downstream 4317 true Scaffold18121: 8962-13278 Capsella grandiflora
Cagra.18121s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold18121: 11279-13278 Capsella grandiflora
Cagra.18121s0003 5.0kb upstream 5.0kb upstream 7317 true Scaffold18121: 3962-11278 Capsella grandiflora
Cagra.18121s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold18121: 3962-8961 Capsella grandiflora
Cagra.18121s0003 5.0kb downstream 5.0kb downstream 7317 true Scaffold18121: 8962-16278 Capsella grandiflora
Cagra.18121s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold18121: 11279-16278 Capsella grandiflora
Cagra.18121s0003 10.0kb upstream 10.0kb upstream 11278 true Scaffold18121: 1-11278 Capsella grandiflora
Cagra.18121s0003 10.0kb upstream 10.0kb upstream 8961 false Scaffold18121: 1-8961 Capsella grandiflora
Cagra.18121s0003 10.0kb downstream 10.0kb downstream 12317 true Scaffold18121: 8962-21278 Capsella grandiflora
Cagra.18121s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold18121: 11279-21278 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376129 5261 Brassicaceae View MSA
123836998 5264 Brassicales-Malvales View MSA
124351285 5266 SBM View MSA
124247835 5268 Malvidae View MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain