Gene : Cagra.18121s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10641:SF457 - TRANSCRIPTION FACTOR AS1 Genomic Order:  4
Name:  ? Cagra.18121s0004 Secondary Identifier:  ? PAC:28914962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18121s0004 0.5kb upstream 0.5kb upstream 1938 true Scaffold18121: 11449-13386 Capsella grandiflora
Cagra.18121s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold18121: 12887-13386 Capsella grandiflora
Cagra.18121s0004 0.5kb downstream 0.5kb downstream 1938 true Scaffold18121: 10949-12886 Capsella grandiflora
Cagra.18121s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold18121: 10949-11448 Capsella grandiflora
Cagra.18121s0004 1.0kb upstream 1.0kb upstream 2438 true Scaffold18121: 11449-13886 Capsella grandiflora
Cagra.18121s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold18121: 12887-13886 Capsella grandiflora
Cagra.18121s0004 1.0kb downstream 1.0kb downstream 2438 true Scaffold18121: 10449-12886 Capsella grandiflora
Cagra.18121s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold18121: 10449-11448 Capsella grandiflora
Cagra.18121s0004 2.0kb upstream 2.0kb upstream 3438 true Scaffold18121: 11449-14886 Capsella grandiflora
Cagra.18121s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold18121: 12887-14886 Capsella grandiflora
Cagra.18121s0004 2.0kb downstream 2.0kb downstream 3438 true Scaffold18121: 9449-12886 Capsella grandiflora
Cagra.18121s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold18121: 9449-11448 Capsella grandiflora
Cagra.18121s0004 5.0kb upstream 5.0kb upstream 6438 true Scaffold18121: 11449-17886 Capsella grandiflora
Cagra.18121s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold18121: 12887-17886 Capsella grandiflora
Cagra.18121s0004 5.0kb downstream 5.0kb downstream 6438 true Scaffold18121: 6449-12886 Capsella grandiflora
Cagra.18121s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold18121: 6449-11448 Capsella grandiflora
Cagra.18121s0004 10.0kb upstream 10.0kb upstream 11438 true Scaffold18121: 11449-22886 Capsella grandiflora
Cagra.18121s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold18121: 12887-22886 Capsella grandiflora
Cagra.18121s0004 10.0kb downstream 10.0kb downstream 11438 true Scaffold18121: 1449-12886 Capsella grandiflora
Cagra.18121s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold18121: 1449-11448 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332901 5261 Brassicaceae Singleton cluster - no MSA
123837865 5264 Brassicales-Malvales View MSA
124348491 5266 SBM View MSA
124249692 5268 Malvidae View MSA
124071895 5270 Rosid View MSA
123753219 5271 Pentapetalae View MSA
122787054 5272 Eudicot View MSA
122045280 5273 Angiosperm View MSA
121310428 5274 Embryophyte View MSA
123347915 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain