Gene : Cagra.18459s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21649:SF17 - CHLOROPHYLL A-B BINDING PROTEIN 4, CHLOROPLASTIC Genomic Order:  5
Name:  ? Cagra.18459s0005 Secondary Identifier:  ? PAC:28913460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18459s0005 0.5kb upstream 0.5kb upstream 1983 true Scaffold18459: 18626-20608 Capsella grandiflora
Cagra.18459s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold18459: 20109-20608 Capsella grandiflora
Cagra.18459s0005 0.5kb downstream 0.5kb downstream 1983 true Scaffold18459: 18126-20108 Capsella grandiflora
Cagra.18459s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold18459: 18126-18625 Capsella grandiflora
Cagra.18459s0005 1.0kb upstream 1.0kb upstream 2483 true Scaffold18459: 18626-21108 Capsella grandiflora
Cagra.18459s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold18459: 20109-21108 Capsella grandiflora
Cagra.18459s0005 1.0kb downstream 1.0kb downstream 2483 true Scaffold18459: 17626-20108 Capsella grandiflora
Cagra.18459s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold18459: 17626-18625 Capsella grandiflora
Cagra.18459s0005 2.0kb upstream 2.0kb upstream 3483 true Scaffold18459: 18626-22108 Capsella grandiflora
Cagra.18459s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold18459: 20109-22108 Capsella grandiflora
Cagra.18459s0005 2.0kb downstream 2.0kb downstream 3483 true Scaffold18459: 16626-20108 Capsella grandiflora
Cagra.18459s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold18459: 16626-18625 Capsella grandiflora
Cagra.18459s0005 5.0kb upstream 5.0kb upstream 6483 true Scaffold18459: 18626-25108 Capsella grandiflora
Cagra.18459s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold18459: 20109-25108 Capsella grandiflora
Cagra.18459s0005 5.0kb downstream 5.0kb downstream 6483 true Scaffold18459: 13626-20108 Capsella grandiflora
Cagra.18459s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold18459: 13626-18625 Capsella grandiflora
Cagra.18459s0005 10.0kb upstream 10.0kb upstream 7112 true Scaffold18459: 18626-25737 Capsella grandiflora
Cagra.18459s0005 10.0kb upstream 10.0kb upstream 5629 false Scaffold18459: 20109-25737 Capsella grandiflora
Cagra.18459s0005 10.0kb downstream 10.0kb downstream 11483 true Scaffold18459: 8626-20108 Capsella grandiflora
Cagra.18459s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold18459: 8626-18625 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372804 5261 Brassicaceae View MSA
123834792 5264 Brassicales-Malvales View MSA
124341061 5266 SBM View MSA
124239114 5268 Malvidae View MSA
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain