Gene : Cagra.18742s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10252//PTHR10252:SF45 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  3
Name:  ? Cagra.18742s0003 Secondary Identifier:  ? PAC:28908133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18742s0003 0.5kb upstream 0.5kb upstream 1499 true Scaffold18742: 10427-11925 Capsella grandiflora
Cagra.18742s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold18742: 10427-10926 Capsella grandiflora
Cagra.18742s0003 0.5kb downstream 0.5kb downstream 1499 true Scaffold18742: 10927-12425 Capsella grandiflora
Cagra.18742s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold18742: 11926-12425 Capsella grandiflora
Cagra.18742s0003 1.0kb upstream 1.0kb upstream 1999 true Scaffold18742: 9927-11925 Capsella grandiflora
Cagra.18742s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold18742: 9927-10926 Capsella grandiflora
Cagra.18742s0003 1.0kb downstream 1.0kb downstream 1999 true Scaffold18742: 10927-12925 Capsella grandiflora
Cagra.18742s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold18742: 11926-12925 Capsella grandiflora
Cagra.18742s0003 2.0kb upstream 2.0kb upstream 2999 true Scaffold18742: 8927-11925 Capsella grandiflora
Cagra.18742s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold18742: 8927-10926 Capsella grandiflora
Cagra.18742s0003 2.0kb downstream 2.0kb downstream 2999 true Scaffold18742: 10927-13925 Capsella grandiflora
Cagra.18742s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold18742: 11926-13925 Capsella grandiflora
Cagra.18742s0003 5.0kb upstream 5.0kb upstream 5999 true Scaffold18742: 5927-11925 Capsella grandiflora
Cagra.18742s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold18742: 5927-10926 Capsella grandiflora
Cagra.18742s0003 5.0kb downstream 5.0kb downstream 3474 true Scaffold18742: 10927-14400 Capsella grandiflora
Cagra.18742s0003 5.0kb downstream 5.0kb downstream 2475 false Scaffold18742: 11926-14400 Capsella grandiflora
Cagra.18742s0003 10.0kb upstream 10.0kb upstream 10999 true Scaffold18742: 927-11925 Capsella grandiflora
Cagra.18742s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold18742: 927-10926 Capsella grandiflora
Cagra.18742s0003 10.0kb downstream 10.0kb downstream 3474 true Scaffold18742: 10927-14400 Capsella grandiflora
Cagra.18742s0003 10.0kb downstream 10.0kb downstream 2475 false Scaffold18742: 11926-14400 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511411 5273 Angiosperm View MSA
122376030 5261 Brassicaceae View MSA
123801120 5264 Brassicales-Malvales View MSA
124298457 5266 SBM View MSA
124150094 5268 Malvidae View MSA
123875775 5270 Rosid View MSA
123459546 5271 Pentapetalae View MSA
122494936 5272 Eudicot View MSA
120784458 5274 Embryophyte View MSA
122826371 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain