Gene : Cagra.18704s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10992:SF873 - ATSEH-RELATED Genomic Order:  1
Name:  ? Cagra.18704s0001 Secondary Identifier:  ? PAC:28893676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.18704s0001 0.5kb upstream 0.5kb upstream 1490 true Scaffold18704: 1-1490 Capsella grandiflora
Cagra.18704s0001 0.5kb upstream 0.5kb upstream 191 false Scaffold18704: 1-191 Capsella grandiflora
Cagra.18704s0001 0.5kb downstream 0.5kb downstream 1799 true Scaffold18704: 192-1990 Capsella grandiflora
Cagra.18704s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold18704: 1491-1990 Capsella grandiflora
Cagra.18704s0001 1.0kb upstream 1.0kb upstream 1490 true Scaffold18704: 1-1490 Capsella grandiflora
Cagra.18704s0001 1.0kb upstream 1.0kb upstream 191 false Scaffold18704: 1-191 Capsella grandiflora
Cagra.18704s0001 1.0kb downstream 1.0kb downstream 2299 true Scaffold18704: 192-2490 Capsella grandiflora
Cagra.18704s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold18704: 1491-2490 Capsella grandiflora
Cagra.18704s0001 2.0kb upstream 2.0kb upstream 1490 true Scaffold18704: 1-1490 Capsella grandiflora
Cagra.18704s0001 2.0kb upstream 2.0kb upstream 191 false Scaffold18704: 1-191 Capsella grandiflora
Cagra.18704s0001 2.0kb downstream 2.0kb downstream 2363 true Scaffold18704: 192-2554 Capsella grandiflora
Cagra.18704s0001 2.0kb downstream 2.0kb downstream 1064 false Scaffold18704: 1491-2554 Capsella grandiflora
Cagra.18704s0001 5.0kb upstream 5.0kb upstream 1490 true Scaffold18704: 1-1490 Capsella grandiflora
Cagra.18704s0001 5.0kb upstream 5.0kb upstream 191 false Scaffold18704: 1-191 Capsella grandiflora
Cagra.18704s0001 5.0kb downstream 5.0kb downstream 2363 true Scaffold18704: 192-2554 Capsella grandiflora
Cagra.18704s0001 5.0kb downstream 5.0kb downstream 1064 false Scaffold18704: 1491-2554 Capsella grandiflora
Cagra.18704s0001 10.0kb upstream 10.0kb upstream 1490 true Scaffold18704: 1-1490 Capsella grandiflora
Cagra.18704s0001 10.0kb upstream 10.0kb upstream 191 false Scaffold18704: 1-191 Capsella grandiflora
Cagra.18704s0001 10.0kb downstream 10.0kb downstream 2363 true Scaffold18704: 192-2554 Capsella grandiflora
Cagra.18704s0001 10.0kb downstream 10.0kb downstream 1064 false Scaffold18704: 1491-2554 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374867 5261 Brassicaceae View MSA
123841521 5264 Brassicales-Malvales View MSA
124341501 5266 SBM View MSA
124238770 5268 Malvidae View MSA
124073968 5270 Rosid View MSA
123753731 5271 Pentapetalae View MSA
122797464 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain